Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02208 ATGGGAAGCTTTTTGTGTTATCTTCTCTTCTACATTTCTTCGTTCTCTCTCTTCTTTTCCATCTCTTCTTCATCTACAGATCTCGAAGTGCTCATGAAGCTCAAAAGCGCCATGATTGGACCAAAAGGTTCTGGCCTACATGACTGGAAACTCTCACCGTCTACGATCTCTCATTGCTCGTTTTCCGGTATTGTCTGCGACGAAGATTCTCGAGTAACTTCTCTAAATGTCTCGTCTATTCAACTTTTCGGAACTCTAGCGCCGGAGATAGGACTGTTAAACAAGCTCGCAAGCCTCACAGTCACCTCCAGCAACCTCACGGGAAAAATTCCCGAAGAGATCGGAAACCTAACCTCTCTCAAGATCTTCAACATCTCCAACAACAACTTTTCTGGCGAATTTCCGGGGTTCATCGTCCAAGGATTGCAGGAGCTCGAGGTCCTCGACATCTATAACAACAACTTCACAGGTACGCTTCCGATCGAGATCATTAAGCTGAAGAAGCTGAAACATCTGCATCTCGGCGGGAATTTCATCTCTGGCGAGATTCCGGCGATCTACTCAGAGATTCAGAGCTTGGAGTACTTAGGTTTGAACGGAAACTGCCATTTTGGTAAGATTCCGGCGAGTTTAAGTCGCCTATCGAACCTTCGAGAACTCTACTTGGGATATTATAATACGTACGAAGGTGGCATTCCGCCGGAGTTCGGATCTTTGAGCTCGTTGAGGAGGCTCGATTTGAGTAGCTGCAATGTCTCCGGCGATATTCCGGTGAGTTTAGGTCGTTTAAAGCAATTAGACTCGTTGTTCTTGCAGTTTAACCGGCTAACAGGTCAGATTCCTGTGGAACTCTCCAACTTAGTTAATTTGAAATCTCTCGATCTCTCCAACAACGAGCTCACCGGAGAGATACCTGAGGGTTTCTCCCAGCTGAAGATGCTTAGTCTTCTCCATCTGTTTCGCAACCATCTCCATGGTCGAATCCCGCCATTCATCGCCGACTTTCCAGATCTCGAGGTATTGCAGCTGTGGGAGAACAACTTCACGTTTGGGCTTCCGGAAAATCTTGGCCGTAACGGGAGGTTAAAGACGCTTGATGTCACTACGAACCATCTCACTGGAACAATACCTCGAGATTTGTGCACCGGTGGAAAATTAGAGGTGCTGATCTTGATGAATAATTTCTTCATTGGACCGATTCCGGAACAACTCGGTGAGTGTAAGTCGTTGACTCGGGTCCGACTCGCGAAAAATTACTTGAACGGAACTATTCCTGCCGGTTTATTCAACCTGCCTTTTGTCGATTTGCTCGAGCTTGGCGACAACATCTTCTCCGGCGAACTCCCGGAGATAATTTCCGGGAAAGCCCTCGGATCGTTGATTCTCTCCAACAACCGGATTACCGGAAAACTTCCAGCGGCGATTGGAAACCTAACCAAACTACAGATTCTATCCCTTCAGCAGAACCAATTTTCCGGTGAAATTCCCCCTGAAATCGGTGATTTAAAGTTGCTATCAAAGATAAATATCAGTAGCAACAATATCACCGGCAAAATTCCGACTACATTATCTCATTCTTCGTCTCTTGAATCAATCGATTTCAGTGGGAATAGTCTCTACGGAGAAATACCGAGAGCGCTTACGAGTCTAAAGATCTTGAGCACTCTTAATTTATCAAGAAACCAATTTACTGGTCAAGTTCCAAATGATATCCGATCAATGGCAAGCCTCACAACTTTAGATCTTTCGTACAATAACCTTTCTGGTGCGATTCCAGTAGCTGGACAATTCTTAGTTTTCAACGAGAGCTCTTTTACAGGAAACCCCAATCTCTGCGGCCCATTACGCCATACAGCTTGCAATTCAGTCATGAATTCAAAAGAAGTTTCTAGCCGAAATGAGTCATCGGTAAAGCTCGTGATCATCATTGTACTACTCGTCACTGTTCTCTTACTATCCATCGTTGCGATTCCAAAGATTAAGAGATACTGGAAGAAGCACCGGAGCTCGAAGGCGTGGAAGCTCACACCCTTCCAGAGACTTGATTTCACGGTCGAGGACGTGCTCGAATGCTTGAAAGAGGAGAACATTATCGGAAAGGGCGGTGCGGGGATCGTTTACCGTGGATCGATGCCCGACAGTGTTGACGTTGCGATCAAGCGGCTCGTCGGGCGAAGCAGCGGGAGGAGTGATCACGGCTTCTCGGCTGAAATTCAGACTCTCGGGAGAATTCGACACAGAAACATTGTGAGGTTGCTGGGGTACGTGTCAAACAAGGACACAAATCTGTTGCTCTATGAGTACATGCCGAATGGGAGCTTGGGAGAACTTCTGCACGGTTCGAAGGGGTCGCATTTTCAGTGGGAGACGAGGTATCGAGTCGCGGTGGAGGCAGCTAAGGGACTTTGTTACCTCCACCATGACTGCTCACCTCTTATTATTCACAGGGACGTTAAGTCGAACAACATCTTGCTTGATTCGGATTTCGAGGCTCATGTTGCAGATTTTGGGTTAGCTAAGTTCTTGCCGGACGCCGGAGCGTCGGAGTGCATGTCTTCGATTGCTGGGTCGTACGGTTACATCGCACCAGAGTATGCTTACACACTGCGGGTGGACGAGAAGAGTGACGTGTACAGCTTTGGTGTGGTGCTGTTGGAGCTGATCACGGGAAGAAAGCCGGTCGGTGAGTTTGGTGACGGGGTCGACATCGTGAGGTGGGTCCGGAAGACAACATCAGAGATCTCAGAGCCGTCTGATGCGGAGTCAGTGCTGGCAGTGGTTGACCGTAGGCTCACCGAGTACCCCTTGACCGGGGTAATAAACCTGTTCAAGGTGGCCATGTTATGTGTGGAAGAGACGAGTGGTGGAAGGCCCACAATGAGGGAGGTGGTCCACATGCTCACCAACCCTACACCATCTCCCCCTACTCTCCTCGCTCTTTAA 2943 0.4805 MGSFLCYLLFYISSFSLFFSISSSSTDLEVLMKLKSAMIGPKGSGLHDWKLSPSTISHCSFSGIVCDEDSRVTSLNVSSIQLFGTLAPEIGLLNKLASLTVTSSNLTGKIPEEIGNLTSLKIFNISNNNFSGEFPGFIVQGLQELEVLDIYNNNFTGTLPIEIIKLKKLKHLHLGGNFISGEIPAIYSEIQSLEYLGLNGNCHFGKIPASLSRLSNLRELYLGYYNTYEGGIPPEFGSLSSLRRLDLSSCNVSGDIPVSLGRLKQLDSLFLQFNRLTGQIPVELSNLVNLKSLDLSNNELTGEIPEGFSQLKMLSLLHLFRNHLHGRIPPFIADFPDLEVLQLWENNFTFGLPENLGRNGRLKTLDVTTNHLTGTIPRDLCTGGKLEVLILMNNFFIGPIPEQLGECKSLTRVRLAKNYLNGTIPAGLFNLPFVDLLELGDNIFSGELPEIISGKALGSLILSNNRITGKLPAAIGNLTKLQILSLQQNQFSGEIPPEIGDLKLLSKINISSNNITGKIPTTLSHSSSLESIDFSGNSLYGEIPRALTSLKILSTLNLSRNQFTGQVPNDIRSMASLTTLDLSYNNLSGAIPVAGQFLVFNESSFTGNPNLCGPLRHTACNSVMNSKEVSSRNESSVKLVIIIVLLVTVLLLSIVAIPKIKRYWKKHRSSKAWKLTPFQRLDFTVEDVLECLKEENIIGKGGAGIVYRGSMPDSVDVAIKRLVGRSSGRSDHGFSAEIQTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHGSKGSHFQWETRYRVAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLPDAGASECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVRWVRKTTSEISEPSDAESVLAVVDRRLTEYPLTGVINLFKVAMLCVEETSGGRPTMREVVHMLTNPTPSPPTLLAL* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02208 980 SUPERFAMILY RNI-like 304 591 - -
Eupl03g02208 980 SMART serkin_6 692 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02208 980 Pfam Protein tyrosine and serine/threonine kinase 693 967 IPR001245 GO:0004672|GO:0006468
Eupl03g02208 980 Gene3D Phosphorylase Kinase; domain 1 659 768 - -
Eupl03g02208 980 Gene3D Ribonuclease Inhibitor 227 331 IPR032675 -
Eupl03g02208 980 PRINTS Leucine-rich repeat signature 290 303 - -
Eupl03g02208 980 PRINTS Leucine-rich repeat signature 574 587 - -
Eupl03g02208 980 ProSiteProfiles Protein kinase domain profile. 692 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02208 980 Gene3D Ribonuclease Inhibitor 140 226 IPR032675 -
Eupl03g02208 980 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Eupl03g02208 980 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 977 - -
Eupl03g02208 980 Pfam Leucine Rich repeat 240 255 IPR001611 GO:0005515
Eupl03g02208 980 Gene3D Ribonuclease Inhibitor 335 623 IPR032675 -
Eupl03g02208 980 Gene3D Ribonuclease Inhibitor 26 139 IPR032675 -
Eupl03g02208 980 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 352 968 - -
Eupl03g02208 980 FunFam Leucine-rich repeat receptor-like kinase 27 141 - -
Eupl03g02208 980 Pfam Leucine rich repeat 265 324 IPR001611 GO:0005515
Eupl03g02208 980 Pfam Leucine rich repeat 545 587 IPR001611 GO:0005515
Eupl03g02208 980 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 227 332 - -
Eupl03g02208 980 SUPERFAMILY L domain-like 50 377 - -
Eupl03g02208 980 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 142 226 - -
Eupl03g02208 980 SMART LRR_typ_2 287 311 IPR003591 -
Eupl03g02208 980 SMART LRR_typ_2 335 359 IPR003591 -
Eupl03g02208 980 SMART LRR_typ_2 574 597 IPR003591 -
Eupl03g02208 980 SMART LRR_typ_2 239 263 IPR003591 -
Eupl03g02208 980 SMART LRR_typ_2 478 502 IPR003591 -
Eupl03g02208 980 SMART LRR_typ_2 550 573 IPR003591 -
Eupl03g02208 980 SMART LRR_typ_2 142 166 IPR003591 -
Eupl03g02208 980 SUPERFAMILY Protein kinase-like (PK-like) 677 967 IPR011009 -
Eupl03g02208 980 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 339 624 - -
Eupl03g02208 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Eupl03g02208 980 Gene3D Transferase(Phosphotransferase) domain 1 769 973 - -
Eupl03g02208 980 ProSiteProfiles Leucine-rich repeat profile. 289 311 IPR001611 GO:0005515
Eupl03g02208 980 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 661 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02208 Eupl-Chr3 52631102 52636359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02208 26 980 Receptor kinase-like Gene Family AT1G75820 66.250 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g02208 PK_Tyr_Ser-Thr 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02208 - - nnu:104604238 1411.74