Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g02196 | ATGGCCGAAACCCCACCTCAGCCACCAATATCGGATCCCGAACCGCTACAATACTGGTGCTACCACTGCGACAAGCAAGTCTCCATCGAAACGCTAACCGATCTCCCCGACATCATCTGTCAAGAATGCAAGAACGGCTTCGTCGAATCGATCTCCGCTGCACTACCACCGCCTCCGGCAGCTCATCGCAGCCAAGAACCCTCTTTCAGTCATCAATTTCTTCAAGTCCTCCGATTAATCGCTCAAGCGGCCCGCGACGACGACGCTCCCCCTCCACCGCCTCCGGATCCAGTCTCCGATCCCTCCGAAGCCGACGATTTCCTCCGTATCGAACTAGATGGATGGGACAACGACGAAGAAGATGACGATGAAGACGACATCGTATTTGGAAACAGCGAGGGTGATCGATCTGATAATGAGATCGGAGACGAAGAGGAAGATCAAGATGAAGACGAAGGAGATCGCCGTCGGAGACGGCGTGACATACTCCGACTCCGTATCAGGGACTTCGCCTCTCGCGCGGCGACAGGACGGAACCGGATCCTCGATTGGTCGGAGATCTTGATGGGATTAGAAGACAATACGATCGAATTGCGCGTCGAGATGCCGGAATCGGATGGATACATGGGGAATCCTGAGGATTATGTTGATGCGGCGGGGTACGAGGTGTTGTTGCAGAATTTGGCGGAGAGCGACGGGGGAGCAAGGAGAGGGGCTCCACCTGCTGCAAGATCTGCCGTTTCGGCGTTACAGACGGTAGAGATCACACCGGAGGAGGAGGGTTTGATATGCGCTATATGTAAGGAATCGGTGCCGGTAGGGGAGAAAGCGAGGAAGTTGCCGTGTGGGCATGGCTACCATGGGGACTGCATAGTGCCATGGTTGGGGTCGAGGAATTCTTGCCCAGTTTGTAGGTTTGAGTTGCCAACGGACGATCCGGAGTATGAAGAGGAGAGGAAGAAGAGATCGACGGCGTCCACCGCTGGTGGGCCGTCTGATTCTGGAGGGAATAATACCGTCTCCAGTTAA | 1029 | 0.551 | MAETPPQPPISDPEPLQYWCYHCDKQVSIETLTDLPDIICQECKNGFVESISAALPPPPAAHRSQEPSFSHQFLQVLRLIAQAARDDDAPPPPPPDPVSDPSEADDFLRIELDGWDNDEEDDDEDDIVFGNSEGDRSDNEIGDEEEDQDEDEGDRRRRRRDILRLRIRDFASRAATGRNRILDWSEILMGLEDNTIELRVEMPESDGYMGNPEDYVDAAGYEVLLQNLAESDGGARRGAPPAARSAVSALQTVEITPEEEGLICAICKESVPVGEKARKLPCGHGYHGDCIVPWLGSRNSCPVCRFELPTDDPEYEEERKKRSTASTAGGPSDSGGNNTVSS* | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g02196 | 342 | SUPERFAMILY | RING/U-box | 258 | 311 | - | - | |
Eupl03g02196 | 342 | MobiDBLite | consensus disorder prediction | 114 | 155 | - | - | |
Eupl03g02196 | 342 | FunFam | E3 ubiquitin-protein ligase RING1-like | 227 | 311 | - | - | |
Eupl03g02196 | 342 | MobiDBLite | consensus disorder prediction | 309 | 324 | - | - | |
Eupl03g02196 | 342 | MobiDBLite | consensus disorder prediction | 308 | 342 | - | - | |
Eupl03g02196 | 342 | MobiDBLite | consensus disorder prediction | 85 | 104 | - | - | |
Eupl03g02196 | 342 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 230 | 311 | IPR013083 | - | |
Eupl03g02196 | 342 | MobiDBLite | consensus disorder prediction | 325 | 342 | - | - | |
Eupl03g02196 | 342 | SMART | ring_2 | 264 | 304 | IPR001841 | - | |
Eupl03g02196 | 342 | ProSiteProfiles | Zinc finger RING-type profile. | 264 | 305 | IPR001841 | - | |
Eupl03g02196 | 342 | MobiDBLite | consensus disorder prediction | 114 | 129 | - | - | |
Eupl03g02196 | 342 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 135 | 309 | - | - | |
Eupl03g02196 | 342 | Pfam | Ring finger domain | 264 | 305 | IPR001841 | - | |
Eupl03g02196 | 342 | Pfam | zinc-ribbon | 17 | 51 | IPR039525 | GO:0061630 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g02196 | Eupl-Chr3 | 52297928 | 52299587 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g02196 | 108 | 321 | C3H Transcription Factor Family | AT5G01980 | 39.910 | 1.12e-35 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl03g02196 | - | - | ming:122072762 | 414.075 |