Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02187 ATGATGCGTCGAGATTTATTGCATTTCTTTCAGCCACGATGCTTTCTTCTATTGTTCGTCGCCGCCATTATCGTTTTTCTCGCGTTTTCCACCTCTCACCAGGAGGAAAATAAGGTGGAAGAGGTGCCCGAAATTACTCACAGAGTATTCTTGGATGTGGATATCGATGAACAGCGTATAGGTAGAATCGTGATTGGATTGTATGGCCAGGTTGTACCAAAAACTGTTGAAAATTTCAGGGCCCTGTGCACAGGGGAGAAGGGCAAGGGTGCTAGTGGAAAAGATCTCCACTATAAGGGAACACCGTTTCATCGTATAGTTTCTGGGTTTATGATACAAGGTGGAGATATTGTGTATCGGGATGGAAGGGGAAATGACTCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAACACTTACATGCAGGTGTTGTTTCCATGGTGAACTCAGGACCTGATTCCAATGGCTCGCAGTTCTTCATAACCACAGTCAAGGCAAGCTGGCTGGACGGGGAGCATGTTGTGTTTGGCAAAGTTATTCAAGGTATGGATACTGTATATGCGATAGAAGGGGGAGCCGGGACCTACAACGGGAAACCCAGAAAGAAGGTTGTTATCGTCGACTCAGGAGAGATACCCATGAGCAAGTGGGATGAAGAAAGCTGA 675 0.4548 MMRRDLLHFFQPRCFLLLFVAAIIVFLAFSTSHQEENKVEEVPEITHRVFLDVDIDEQRIGRIVIGLYGQVVPKTVENFRALCTGEKGKGASGKDLHYKGTPFHRIVSGFMIQGGDIVYRDGRGNDSIYGGTFPDENFKIKHLHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYNGKPRKKVVIVDSGEIPMSKWDEES* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02187 224 Gene3D - 35 220 IPR029000 -
Eupl03g02187 224 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 54 212 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 82 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 50 214 IPR002130 GO:0000413|GO:0003755
Eupl03g02187 224 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 98 115 IPR020892 GO:0003755|GO:0006457
Eupl03g02187 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 48 215 - -
Eupl03g02187 224 FunFam Peptidyl-prolyl cis-trans isomerase 34 221 - -
Eupl03g02187 224 SUPERFAMILY Cyclophilin-like 44 215 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02187 Eupl-Chr3 52185887 52196726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02187 61 212 U-box Gene Family AT5G67530 40.523 4.52e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02187 - - nnu:104604229 412.92