Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02186 ATGGGAGTTCTGTTATCTCCGACGTCTCCAGTGGGAAAATGGTTAGGGTTTGTGACGGCCGTTTGGGTTCAGGCCATCTCTGGAAACAACTACACGTTTTCGAACTACTCTGACGCTCTGAAATCTCTCATGGCTCTTACTCAATTAGAGCTTAATAATCTCTCCGTCGCCAAAGATGTTGGGAAGGCTTTTGGGATTCTTGCTGGTCTCGCTTCGGATCGTCTTTCTACTCCGGTTATTTTAATTATCGGATCTGTTGAGGGATTTATAGGTTACGGAGTTCAATGGCTCGTTGTTAGCCAGAAAATTCGTCCTCTTCCTTACTGGCAGATGTGTATATTTTTGTGCATGGGAGGCAACAGTACCACTTGGATGAACACAGCAGTCCTTGTGACCTGCATGCGTAACTTCCGAAAGAACCGGGGCCCCGTTTCGGGCATTCTCAAGGGCTACGTCGGTCTCAGTACCGCAATCTTTACCGACCTCTGCACCGCTCTATTCTCAGACAGCCCCGCCAACTTCCTCCTCATGCTCGCCATCATCCCCGCCGTCGTCTGCCTCACCGCCATTCTCTTCCTCCGCGAAGTTCCACCCTCCACCACCACCTCAACCACCCAAGATAAACATGAATCTAAGTACTTCCACGTCTTTAGCACCGTGGCAGTCATCATAGCCGTCTATCTCTTAGTCTTCGACACCACAGGAAATCACGGCCACATACTCTCTCTTGCATTCGCTTCCGGACTTCTCTTCCTCTTGGCTACACCATTAGCCGTTCCATTGTACTCCGCATTACAAAAGTGGACCCTGCCCGGTTCAAACTCCAACCCGGATATCGAACGTCAGGTCCAAGAACCATTACTGATTCAAGAAGTTGTACCGGAGACTCAACAGAAACCGGAGGTAGAGACGGCGAAGGTGGTGGATGATGTTGCGATCAAACGGAGACCGACGCTCGGTGAAGATCACACGATCATGGAAGCGTTACTGACGCTTGATTTCTGGATTCTGTTCGTATCGTTTCTTTGCGGCGTGGGCACTGGTTTGGCGGTGATGAACAACATGGGACAAATGGGGCTGGCTCTTGGGTACGTGGACGTCTCCATTTTCGTGTCGTTGACGAGCATCTTTGGGTTTTTCGGACGTATCGGTTCGGGTACCGTCTCGGAGTACTTTCTCGAGAGAGCTGCAACACCAAGGCCTTTATGGAACGCAGCTTCTCAGATTCTAATGGCCGTTGGATACATGGTGATGGCCATGGCAATGCCAGGATCATTGTACGTCGGTTCGATCGTGGTGGGGATTTGCTATGGGGTCCGTCTTGCTGTTACAGTTCCAACTGCATCTGAACTATTCGGCCTCAAATACTATGGCCTGATCTACAACATCCTCATCTTGAACCTTCCCCTCGGTTCATTCCTCTTTTCTGGCCTGCTCGCTGGGTTATTATACGACGCACAAGCGACTGCCACGGCAGGAGGTGGCAACACGTGCGTAGGGGCTCATTGTTACAGGCTTGTGTTCGTGGTCATGGCTTTTGCTTGCGTGGTTGGGTTTGGCTTGGACGTCTTACTTTCTTTTAGAACGAAGAACCTATATTCCAAGATTCACCTGGCCAAGAAGTCTAGGAAATCGACGGTGAATCCGAAGGCCATCAAAGGCTAA 1665 0.5033 MGVLLSPTSPVGKWLGFVTAVWVQAISGNNYTFSNYSDALKSLMALTQLELNNLSVAKDVGKAFGILAGLASDRLSTPVILIIGSVEGFIGYGVQWLVVSQKIRPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDSPANFLLMLAIIPAVVCLTAILFLREVPPSTTTSTTQDKHESKYFHVFSTVAVIIAVYLLVFDTTGNHGHILSLAFASGLLFLLATPLAVPLYSALQKWTLPGSNSNPDIERQVQEPLLIQEVVPETQQKPEVETAKVVDDVAIKRRPTLGEDHTIMEALLTLDFWILFVSFLCGVGTGLAVMNNMGQMGLALGYVDVSIFVSLTSIFGFFGRIGSGTVSEYFLERAATPRPLWNAASQILMAVGYMVMAMAMPGSLYVGSIVVGICYGVRLAVTVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGLLYDAQATATAGGGNTCVGAHCYRLVFVVMAFACVVGFGLDVLLSFRTKNLYSKIHLAKKSRKSTVNPKAIKG* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02186 554 Pfam Nodulin-like 13 261 IPR010658 -
Eupl03g02186 554 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 534 - -
Eupl03g02186 554 CDD MFS_Mch1p_like 12 518 - -
Eupl03g02186 554 Gene3D MFS general substrate transporter like domains 16 276 IPR036259 -
Eupl03g02186 554 Gene3D MFS general substrate transporter like domains 292 550 IPR036259 -
Eupl03g02186 554 SUPERFAMILY MFS general substrate transporter 28 531 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02186 Eupl-Chr3 52164849 52171157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02186 13 548 Nodulin-like Gene Family AT4G34950 69.052 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02186 - - nnu:104590039 805.053