Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02174 ATGGTTGCTGCGTCCTCGCCTTCATTTCTCCTCTCCTCGCCTAACTTCTTCGGCACAAAGATCGCCGTCAACGCACCTTCTCCTAATTCGGCGTCTGTCAGATTCCAGCCACCTCGTTTCTCCGCTGCCTACACCTCGGCGGAGAAGGTGAGGTCACCGTACTTAATGGCTTCTTCGTCTGCATCGCTATATGAGGTCCTTGGGATTTCGATGGGTGCCACGTGTCAGGAGATCAAGGCAGCGTATCGGAAATTAGCTCGAGTTTGTCATCCAGATGTCGTGACTACCGATCGGAAGGATACTTCAGCTGATGAGTTCATGAAGATCCACGCCGCGTATTCGACGCTGTCCGATCCCCAAAAACGCGCCGACTACGATCAGAAGCTATTTAGGCGGAGACGGCCGTTTTGTTCTCCGTCTGCCACCTCTGAGTCTACATTTACCCCGTCGTCGATGTCCGGATTTTCCGGCAATACTCGCCGGACTTGGGAGACTGATCAGTGCTGGTAG 510 0.5373 MVAASSPSFLLSSPNFFGTKIAVNAPSPNSASVRFQPPRFSAAYTSAEKVRSPYLMASSSASLYEVLGISMGATCQEIKAAYRKLARVCHPDVVTTDRKDTSADEFMKIHAAYSTLSDPQKRADYDQKLFRRRRPFCSPSATSESTFTPSSMSGFSGNTRRTWETDQCW* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02174 169 SMART dnaj_3 61 121 IPR001623 -
Eupl03g02174 169 PRINTS DnaJ domain signature 101 121 IPR001623 -
Eupl03g02174 169 PRINTS DnaJ domain signature 82 97 IPR001623 -
Eupl03g02174 169 PRINTS DnaJ domain signature 64 82 IPR001623 -
Eupl03g02174 169 Pfam DnaJ domain 63 126 IPR001623 -
Eupl03g02174 169 CDD DnaJ 64 118 IPR001623 -
Eupl03g02174 169 MobiDBLite consensus disorder prediction 138 169 - -
Eupl03g02174 169 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Eupl03g02174 169 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 22 169 - -
Eupl03g02174 169 SUPERFAMILY Chaperone J-domain 57 133 IPR036869 -
Eupl03g02174 169 ProSiteProfiles dnaJ domain profile. 62 129 IPR001623 -
Eupl03g02174 169 Gene3D DnaJ domain 50 147 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02174 Eupl-Chr3 51974250 51975544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02174 56 126 C2H2 Transcription Factor Family AT1G74250 43.590 1.14e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02174 - - nnu:104605549 216.853