Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02162 ATGGCGGCGACTGTATCTGCTTGGGCGAAACCAGGGGCATGGGCTCTTGATTCTGAAGAACATGAAGCAACCCTCCTTCAACAAGAGAAAGAAACAGAGAAAGAGAGAGAAAACGGTCACTTCGACTACATCACAAATCAACACCAGCAGAAGGAAACCCTCTCAGATTTCCCATCCCTTGCCGCAGCGGCAACCACCAAGACTAAGAAGAAGAAAGCGCAACCTGTCTCCCTCGCCGAGTTCACCAACGGTAAACAAGTAACCCATGGCGCAGCCAAAGCTTCTCAGACCACCCAAGCCAAGGGTCTCACCCCGGACGAGCTCTTCGTCCTTCCAACCGGCCCACGTGAACGCTCAGCCGAAGAGCTTGAGCGCTCTTCTCGCCTCGGCGGTGGATTCCGCTCTTATGGTTCGGTTGATAATGGCCGAAGCAGGTATTCTAACGGCGACGATTCGTCGAACAGTCGGTGGGGATCTTCTAGGGTTTCTGATGAGCCGCGTAGGAATGGAAGTTTTAATAAGGAAATCAACAGGGAATCTGCTCCTTCGCGGGCTGATGAGATTGATGATTGGGGTGCGGCGAAGAAATCCATGGGAGCACCTCCGGCGTTCGAGCGGAAAGAGAGGGGAGGGGGGTTTTTCGATTCGCAGTCTAGGGCTGATGAATCGGACAGTTGGGTTTCCAAGAAGAGCTTTGTTCCTTCGGAGTCACGGAGAGTCGGCGGTGGTGGTGGAGGGTTTGAGAATCAGAGAGAGAGGAGGGGGGGTTTTGATATGTTTCAGAAGGAGACCTCGAATGGAGGCGGTGCGGATTCGGATTCCTGGGGGAAGAAGAGGGAAGAAGGGACCGGGACTGGGACCGGAAGCGGAAGGCCGAGGCTTGTGTTGCAGCCGAGGTCATTGCCAGTAAGCAACGGCGAGCAGCAGCAGCAGCAGTCGTTGGGGTCTACGACGAAAACTAAGGGTTCGAACCCATTTGGCGAGGCACGGCCGAGGGAGGAGATTTTGGCAGAAAAAGGGCAAGATTGGAAGAAGATTGATGAGCAGCTTGAGTCGATTAAGATTAAGGAGATAGGTTCAGGAGGACCTGTGCTAAGTGATGGACCGATGTTTGGGAAGAGAAGCTTCGAGACTGGGCATGGGCGGGTGACTTCGCCTGAGGACCGGACAGAAAGGAGTTGGAGAAAGACAGAGTCATTTGATGTTCCTCCCCCAAGTGCTGAGAAAGCCGACGAGGATGGAGGCGCGACTGAAAACTGA 1260 0.5413 MAATVSAWAKPGAWALDSEEHEATLLQQEKETEKERENGHFDYITNQHQQKETLSDFPSLAAAATTKTKKKKAQPVSLAEFTNGKQVTHGAAKASQTTQAKGLTPDELFVLPTGPRERSAEELERSSRLGGGFRSYGSVDNGRSRYSNGDDSSNSRWGSSRVSDEPRRNGSFNKEINRESAPSRADEIDDWGAAKKSMGAPPAFERKERGGGFFDSQSRADESDSWVSKKSFVPSESRRVGGGGGGFENQRERRGGFDMFQKETSNGGGADSDSWGKKREEGTGTGTGSGRPRLVLQPRSLPVSNGEQQQQQSLGSTTKTKGSNPFGEARPREEILAEKGQDWKKIDEQLESIKIKEIGSGGPVLSDGPMFGKRSFETGHGRVTSPEDRTERSWRKTESFDVPPPSAEKADEDGGATEN* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02162 419 MobiDBLite consensus disorder prediction 140 160 - -
Eupl03g02162 419 Coils Coil 16 38 - -
Eupl03g02162 419 MobiDBLite consensus disorder prediction 405 419 - -
Eupl03g02162 419 MobiDBLite consensus disorder prediction 380 398 - -
Eupl03g02162 419 Pfam Plant specific eukaryotic initiation factor 4B 7 354 IPR010433 GO:0003743
Eupl03g02162 419 MobiDBLite consensus disorder prediction 326 340 - -
Eupl03g02162 419 MobiDBLite consensus disorder prediction 79 103 - -
Eupl03g02162 419 MobiDBLite consensus disorder prediction 359 419 - -
Eupl03g02162 419 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 391 IPR010433 GO:0003743
Eupl03g02162 419 MobiDBLite consensus disorder prediction 301 324 - -
Eupl03g02162 419 MobiDBLite consensus disorder prediction 161 193 - -
Eupl03g02162 419 MobiDBLite consensus disorder prediction 64 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02162 Eupl-Chr3 51822168 51828343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02162 1 400 Eukaryotic Initiation Factors Gene Family AT4G38710 49.761 3.75e-77 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02162 - - nnu:104607597 530.02