Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02153 ATGGATCAGTGGAAGCCCGAAGATTTCCGTCAATCCATTCAAGCAGATCTAGCGGTTACAGATTTTCATCAACCTCCTCCTGATCTTTGTGTGCCGTCCAATCGGTTACAGACCTCGCACCCGGAATCCAGGTTGACCATTTATTCTGAAAAAAAAGAGCTATTTATTGCTCAATTTCGTTGCCAAAGGCTGGAAGTGGAAGCCAAGGATTCCATTGCTGCAAGAAAAGTTCAGAAGGCAGACCGTGAGAAATTACGGAGGGATCGACTAAATGAGCAGTTTCTTGAGTTGGGAAATGCTCTAGACCCTGATAGGCCCAAGAATGACAAGGCAACTATCCTAGCTGATACAATCCAAATGCTGAATGATTTGACTGCTCAAGTCAACAGACTGAAAGCCGAGTATGCAACAATGTCAGAAGAATCACGCGAGTTGACACAGGAGAAGAACGAGCTTAGAGACGAGAAGGCATCTCTAAAATCAGATATTGACAGCCTCAATGTTCAGTATCAGCAGAGACTTAGGGTTATGTTCCCATGGGCTGCAATGGATCCTTCAGTTGTTATGGGCCCACCTTCCTATCCATTCCCAATGCCGGTTCCTGTTCCTGCGGGCCCGATTCCCATGCACCCATCTCTTCAGCCATTTCCCTTCTTTAGAAATCAGAATCCTGGGGCCATTCCTAATCCCTGTTCGACTTTTATCCCATATTCATCTCCCGGTAATCCTCAGATTGAACAGCCATCCACCCAATATGTATCTTCACATTTGCAGCCAAGCAGTAGGTCCCACACTTCAAGCAAACAAGATTCCAAAAGCAAGTCATCAAATCGGCAGAGGGGCAGCAATGTTGAAAGAAGTGATGATTCTAATGATGTAGCAACGGATCTGGAACTCAAGACACCTGGATCTACTGCAGACCAGGAGCTGTCATCTGGAGAAAGGAAAGGTAAGCAGTCTCAGAAGAAGGAAAGCAGTGTTACAGATGGGAGTTGTTCAAGCAGGTGTTCTTCATCTCGAGGTCTACAGGAAAGCGCCTCCAATAGTGTGGGTGATGGTCCAAAGGCCAAGAACTAA 1077 0.4615 MDQWKPEDFRQSIQADLAVTDFHQPPPDLCVPSNRLQTSHPESRLTIYSEKKELFIAQFRCQRLEVEAKDSIAARKVQKADREKLRRDRLNEQFLELGNALDPDRPKNDKATILADTIQMLNDLTAQVNRLKAEYATMSEESRELTQEKNELRDEKASLKSDIDSLNVQYQQRLRVMFPWAAMDPSVVMGPPSYPFPMPVPVPAGPIPMHPSLQPFPFFRNQNPGAIPNPCSTFIPYSSPGNPQIEQPSTQYVSSHLQPSSRSHTSSKQDSKSKSSNRQRGSNVERSDDSNDVATDLELKTPGSTADQELSSGERKGKQSQKKESSVTDGSCSSRCSSSRGLQESASNSVGDGPKAKN* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02153 358 Coils Coil 73 93 - -
Eupl03g02153 358 Pfam Helix-loop-helix DNA-binding domain 75 124 IPR011598 GO:0046983
Eupl03g02153 358 Coils Coil 114 169 - -
Eupl03g02153 358 MobiDBLite consensus disorder prediction 230 266 - -
Eupl03g02153 358 CDD bHLH_AtILR3_like 79 153 - -
Eupl03g02153 358 MobiDBLite consensus disorder prediction 324 352 - -
Eupl03g02153 358 MobiDBLite consensus disorder prediction 230 358 - -
Eupl03g02153 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 144 IPR036638 GO:0046983
Eupl03g02153 358 MobiDBLite consensus disorder prediction 267 295 - -
Eupl03g02153 358 Gene3D - 72 175 IPR036638 GO:0046983
Eupl03g02153 358 SMART finulus 80 130 IPR011598 GO:0046983
Eupl03g02153 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 124 IPR011598 GO:0046983
Eupl03g02153 358 PANTHER TRANSCRIPTION FACTOR BHLH121 53 356 IPR044579 GO:0003700|GO:0006879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02153 Eupl-Chr3 51607183 51616605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02153 55 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 56.031 2.19e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl03g02153 HLH 5.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02153 - - nnu:104600134 518.079