Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02147 ATGGGGCCTTGTCTTTCCACCACCAAGGTCAGTGGTTCCAATAGCAACACCACTACCACCAATAGGTGTCAGAAAGAGAGCTCCAAACCCTCTTCAACAGTAATTCAACAGGACCAATCTCAGCATCACCGGCAGAAACCATACGAGAGCCATAAAAATCGATCAGAACAGCAGAGGAATTCACAGCAGCGGCAGCAACACAAGGAGAAAGGACAGTCAAGGCGACCTAGCGGGGTTGTGCCATGTGGGAAGCGGACGGATTTCGGATACGCAAAGGATTTTGATAAGAAGTATTCGATCGGGAAATTGTTGGGTCATGGGCAGTTTGGGTACACGTATGTTGCCACAGATAAGTCGAATGGGGATCGGGTTGCGGTCAAGAGGATAGAGAAGAATAAGATGATCCTTCCTATTGCCGTTGAAGATGTTAAGCGAGAGGTCAAGATATTGCAAGCCCTCACAGGCCACGAGAATGTGGTTCAATTCCATAATGCATTTGAGGACGATTCTTATGTCTACATAGTTATGGAGTTATGTGAGGGTGGCGAACTACTGGATCGGATATTGGCCAAAAAAGATAGCCGTTATACTGAGAAAGATGCAGCAAAAATAGTGCGACAGATGCTCAAAGTTGCAGCTGAATGCCATTTACATGGTTTGGTACATCGTGACATGAAACCTGAGAATTTTCTCTTCAAGTCAACCAAAGGGGAGTCACCCCTGAAGGCCACAGATTTTGGTCTGTCAGACTTCATAAAGCCAGGGAGGAAGTTCCAAGATATCGTCGGCAGTGCCTATTATGTTGCGCCGGAAGTGCTGAAACGCAAATCGGGGCCTGAATCGGATGTTTGGAGTATCGGTGTTATTACATACATTCTGCTTTGTGGGAGGCGTCCATTTTGGGACAAGACTGAGGATGGTATATTCAAGGAGGTCTTAAGGAACAAGCCTGATTTCCGCCGGAAGCCATGGCCAAGCATAAGCAATAGTGCTAAAGATTTTGTTAAGAAGCTATTGGTGAAGGATCCTCGTGCAAGACTGACTGCTGCTCAAGCCTTGTCACACCCATGGGTTAGAGAAGGGGGAGATGCCTCAGAGATCCCTGTTGATATATCTGTGCTATCCAACATGCGGCAATTTGTGAAGTACAGTCGTTTGAAGCAGTTTGCGCTTAGGGCATTGGCCAGTACACTTAATGAAGAGGAGCTGGCTGATCTGCGGGATCAGTTTCATGCAATTGACGTGGATAAAAATGGCTCTATCAGTCTTGAAGAAATGAGACAAGCCCTTGCAAAAGATCTGCCTTGGAAAATGAAGGAACCACGTGTTCTAGAGATTCTTCAAGCGATTGACAGCAACACAGATGGGCTTGTGGACTTCACTGAATTTGTTGCGGCCACTCTACATGTGCATCAGTTGGAGGAACACGACTCTGAGAAGTGGCAGTTGCTATCTCAAGCTGCTTTCGAGAAATTTGACATGGATAGAGATGGATTTATCACACCTGATGAACTGAAGATGCACACCGGACTGAAGGGCTCCATTGACCCACTTCTAGAGGAGGCTGACATTGACAAAGATGGGAAGATAAGCTTATCAGAATTCCGTAGACTTTTAAGAACTGCAAGCCTGAGTTCACGCAATGTCCCCAGCCCATCTGGTTTCCGAAATTCTCGCAAAGTGTAG 1686 0.4644 MGPCLSTTKVSGSNSNTTTTNRCQKESSKPSSTVIQQDQSQHHRQKPYESHKNRSEQQRNSQQRQQHKEKGQSRRPSGVVPCGKRTDFGYAKDFDKKYSIGKLLGHGQFGYTYVATDKSNGDRVAVKRIEKNKMILPIAVEDVKREVKILQALTGHENVVQFHNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAKIVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKGESPLKATDFGLSDFIKPGRKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPVDISVLSNMRQFVKYSRLKQFALRALASTLNEEELADLRDQFHAIDVDKNGSISLEEMRQALAKDLPWKMKEPRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSEKWQLLSQAAFEKFDMDRDGFITPDELKMHTGLKGSIDPLLEEADIDKDGKISLSEFRRLLRTASLSSRNVPSPSGFRNSRKV* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02147 561 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Eupl03g02147 561 Gene3D Phosphorylase Kinase; domain 1 94 180 - -
Eupl03g02147 561 ProSiteProfiles Protein kinase domain profile. 98 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02147 561 FunFam calcium-dependent protein kinase 28-like 184 377 - -
Eupl03g02147 561 Gene3D Transferase(Phosphotransferase) domain 1 181 379 - -
Eupl03g02147 561 CDD STKc_CAMK 97 357 - -
Eupl03g02147 561 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Eupl03g02147 561 SMART efh_1 514 542 IPR002048 GO:0005509
Eupl03g02147 561 SMART efh_1 484 512 IPR002048 GO:0005509
Eupl03g02147 561 SMART efh_1 405 433 IPR002048 GO:0005509
Eupl03g02147 561 SMART efh_1 442 470 IPR002048 GO:0005509
Eupl03g02147 561 ProSiteProfiles EF-hand calcium-binding domain profile. 486 515 IPR002048 GO:0005509
Eupl03g02147 561 Gene3D - 380 538 - -
Eupl03g02147 561 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Eupl03g02147 561 Pfam EF-hand domain pair 487 539 IPR002048 GO:0005509
Eupl03g02147 561 Pfam EF-hand domain pair 405 467 IPR002048 GO:0005509
Eupl03g02147 561 MobiDBLite consensus disorder prediction 1 41 - -
Eupl03g02147 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Eupl03g02147 561 FunFam CDPK-related kinase 1 91 183 - -
Eupl03g02147 561 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Eupl03g02147 561 FunFam Calcium-dependent protein kinase 28 399 468 - -
Eupl03g02147 561 SUPERFAMILY Protein kinase-like (PK-like) 96 373 IPR011009 -
Eupl03g02147 561 Pfam Protein kinase domain 98 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02147 561 MobiDBLite consensus disorder prediction 1 84 - -
Eupl03g02147 561 ProSitePatterns EF-hand calcium-binding domain. 523 535 IPR018247 -
Eupl03g02147 561 SMART serkin_6 98 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02147 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 532 - -
Eupl03g02147 561 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Eupl03g02147 561 ProSiteProfiles EF-hand calcium-binding domain profile. 518 545 IPR002048 GO:0005509
Eupl03g02147 561 Gene3D - 399 468 - -
Eupl03g02147 561 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Eupl03g02147 561 MobiDBLite consensus disorder prediction 42 74 - -
Eupl03g02147 561 SUPERFAMILY EF-hand 383 541 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02147 Eupl-Chr3 51484857 51493964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02147 1 561 EF-hand Containing Proteins AT2G17890 75.826 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl03g02147 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02147 K13412 - ming:122074745 966.837