Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02135 ATGGAGAAATCAAGGGAACACTCATCTGTTGCACACGGTCGACCAACGGGCGTAGCATATGCGGTGATCATACATACTAGTTGGGTCTCACTAGTCCAAGGGTCCCAACCAGATGATCTAGTCCAAGATCAAGACAACAGACAGTTGGAGCGGCTATTGAATTGCTATGACCCTTTGGATCCGAATGGGAATATTACGGTTACTATGGACATCTATAAATGGACTATGGATGGTTATGTGGCGAGGGTGACTATCCAAAACTACTACCAGTACCGCCACATTGACAAACCCGGTTGGAAGCTTGGATGGACATGGGCCAGGAACGAGGTAATCTGGTCTATGACTGGTGCCTTTGCTACCCAGCAGGGGAACTGCTCAGACTTCAAGTACCAGATTCCTCACTCGTGCAAGAGAGACCCGGTTATTGTTGATCTCATGCCGGATGCCAATGGAGATAACAGAACAGAAAACTGCTGCCATGGCGGCATACTGGCTGCATGGGCTATCAATCCTCCCCAGTCCTTCTCGTCGTTTGTGGTTACTGTTGGCAACTTGCAGGGAAATTCTTCAGGCTATGCGCCTCAAAATGTTACTTTGATGGCACCGGGGCCAGGCTACACTTGCGGCTTGTTCGCGGACGTTAAACCCACGGTATTTCCAGATATCGGTGGTAGAAGAGAAGTGCAGGTTTTCAGGACATGGAAATCGACATGCACTTACTCTAGTTTTGTAGCCAACAAGGCACCCACCTGTTGTGTTTCGCTCTCTACATTTTACAATCCTACCATCACTTCATGCTCTATCTGCAGCTGTGGATGCAAGCTCGCGGACAACGCAACAACCTCATGCATTGATCCGGGTTCCTCGTTATCACCGGTTTTACCCGAGATCTATAACATAATCCAATGCACTGATCACATGTGCCCAATCCGAGTCCACTGGCATCTAAAGAACAACTACAAGGACCGTTGGAGAGTGAAATTGACAGTCTCTAACTACAACTATATGACAAACTACTCCGACTGGAATGTGTTGATTCAGCATCCTGGTTTCAACTTGCCTACCATAACATACAGCTTCAACAGTACGTTGCTCCCAACTGTCGGGTTTGCAGATGAGGTGGCCCTCTTTTGGGGGATAGAATACTACAACAATGAGCTTCTACAAGCCAAAGAGAAGCAAGTGGGCTCGTTGACAACAGAGATACTTATGGGGAAGGATGCACACTCGTTTACATTGAAAAATGGGTGGGCTTTCCCCCGAAGAGTCTATTTTAATGGCGAAAACTGTGAAATGCCTCTTCCAGACGATTTCCCTGTACTACCGAATAGTAGCTCTAGTCTACATCCTAGCAGCCACCTCATCTTTCTTCTCATTGCTCTCTATTTGTCTTCCAAAATCTAG 1404 0.4715 MEKSREHSSVAHGRPTGVAYAVIIHTSWVSLVQGSQPDDLVQDQDNRQLERLLNCYDPLDPNGNITVTMDIYKWTMDGYVARVTIQNYYQYRHIDKPGWKLGWTWARNEVIWSMTGAFATQQGNCSDFKYQIPHSCKRDPVIVDLMPDANGDNRTENCCHGGILAAWAINPPQSFSSFVVTVGNLQGNSSGYAPQNVTLMAPGPGYTCGLFADVKPTVFPDIGGRREVQVFRTWKSTCTYSSFVANKAPTCCVSLSTFYNPTITSCSICSCGCKLADNATTSCIDPGSSLSPVLPEIYNIIQCTDHMCPIRVHWHLKNNYKDRWRVKLTVSNYNYMTNYSDWNVLIQHPGFNLPTITYSFNSTLLPTVGFADEVALFWGIEYYNNELLQAKEKQVGSLTTEILMGKDAHSFTLKNGWAFPRRVYFNGENCEMPLPDDFPVLPNSSSSLHPSSHLIFLLIALYLSSKI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02135 467 PIRSF COBRA 46 466 IPR006918 GO:0010215|GO:0016020
Eupl03g02135 467 PANTHER PROTEIN COBRA 54 456 IPR006918 GO:0010215|GO:0016020
Eupl03g02135 467 Pfam COBRA-like protein 79 241 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02135 Eupl-Chr3 51197716 51214171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02135 56 461 COBRA Gene Family AT3G29810 51.707 4.78e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02135 - - jre:109006563 629.017