Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02127 ATGACGGAGAGAGCTCGTTCTGCAACTTTTCTCTTATACTTTCTCGCTCTTGTCTTCATGGCTCTCTCTACTTTCTTACCAACGACCTCATCAACCAAACAAGCAGCTCCCAAACGTAAGAGAAAACAGCAAAAACAACCCTCTTCATGGGATCAAATCAAGAACCTCGTCACCTGTAAACAGATCGAAGGGTCACAAGTTCACGACCCATCGAAGAACGTTGTTGGGTACTCGAAGTTGGGTTCTTCTTGTAGTTCTATCTGTAGTTTCAGAGACGTTGTTCATGGGAACACCAGAGTGGTACACAGAGCCGATAACTCGCCGGAGAGTAGTAGTGTGGGTCAGGAAACTGGGCTTTTGAGTCGGAAAGCGATGACTGGGTCATCGACTAGGCCGTCGTCAGGTTCGATGAGATCGAACGGTGTTGGTGGAGCGAACTCATCGTCGTCGTCAAGAGGGATGCACTTCAGGAAGCTTTCTGGGTGTTATGAGTGCCATATGATCGTCGATCCTAGCAGGTTCCCATCTCCAAGGACTACTATCTGTGCTTGCTCTGAGTGTGGAGAAGTCTTCCCGAAGATTGAAAGCTTGGAGCTTCATCAAGCCGTAAGACATGCGGTTTCAGACCTGGGTCCTGAAGATTCTGGCCGTAACATAGTTGAGATAATTTTCAAATCAAGCTGGCTTAAGAAAAACAGCCCGATCTGCAAGATCGAACGGATATTAAAGGTCCACAACACTCAGCGGACTATCCAACGGTTTGAGGACTGTCGAGATGCAGTAAAGGCCCGTACTAATAACAGCACCAAGAAAAACCCCAGGTGCGCTGCCGACGGCAACGAACTACTGAGGTTCCACTGCACCACGTTAACCTGCACATTGGGCGCACGCGGCTCCTCGAGCCTATGCGGCTCCGTTCCGGGCTGCGGTGTGTGCACGATCATCAGGCACGGCTTTCCAGGGAAGGCAAACGATTGCAAGGGGGTGCGCACTACTGCCAGCAGTGGTAGGGCCCACGACTGCTTGACTAGTGCCGAAGGAAGGAGGGCCATGCTAGTGTGTCGGGTGATCGCGGGAAGAGTGAAGCGTATTGCGGATGATGTGCCGGTGGAAGAGGAGAGCGTGTCTGCCGGCACTTACGATTCAGTCGCCGGGTATACAGGGATATACACGAATCTCGAGGAACTCATGGTTTTCAATCCGAAGGCCATCCTTCCGTGCTTTGTCGTGATCTACAAGGCCTTTGATCTGTAA 1254 0.5112 MTERARSATFLLYFLALVFMALSTFLPTTSSTKQAAPKRKRKQQKQPSSWDQIKNLVTCKQIEGSQVHDPSKNVVGYSKLGSSCSSICSFRDVVHGNTRVVHRADNSPESSSVGQETGLLSRKAMTGSSTRPSSGSMRSNGVGGANSSSSSRGMHFRKLSGCYECHMIVDPSRFPSPRTTICACSECGEVFPKIESLELHQAVRHAVSDLGPEDSGRNIVEIIFKSSWLKKNSPICKIERILKVHNTQRTIQRFEDCRDAVKARTNNSTKKNPRCAADGNELLRFHCTTLTCTLGARGSSSLCGSVPGCGVCTIIRHGFPGKANDCKGVRTTASSGRAHDCLTSAEGRRAMLVCRVIAGRVKRIADDVPVEEESVSAGTYDSVAGYTGIYTNLEELMVFNPKAILPCFVVIYKAFDL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02127 417 Gene3D - 206 414 - -
Eupl03g02127 417 ProSiteProfiles Zinc finger C2H2 type domain profile. 182 206 IPR013087 -
Eupl03g02127 417 SUPERFAMILY ADP-ribosylation 208 413 - -
Eupl03g02127 417 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 48 412 - -
Eupl03g02127 417 ProSitePatterns Zinc finger C2H2 type domain signature. 182 205 IPR013087 -
Eupl03g02127 417 MobiDBLite consensus disorder prediction 103 153 - -
Eupl03g02127 417 MobiDBLite consensus disorder prediction 30 49 - -
Eupl03g02127 417 FunFam C2H2-like zinc finger protein 206 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02127 Eupl-Chr3 51109239 51112335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02127 20 416 C2H2 Transcription Factor Family AT1G75710 62.581 2.90e-180 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl03g02127 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02127 - - nnu:104605577 668.307