Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02126 ATGGAACCTCAACAACAACAACAACAGGTACAGCAACAACCACAGGAAGAAAGCAGCAGTAGTAGCAAGAGCAGTTTTCTTTGCAGGCAGAGTAGTACCAGGTGGACGCCCACGGCTGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAGTTAGGTCTCCAAGTGCAGAGCAGATACAGAGAATCTCGGCTAGGTTGAGACAGTACGGCAAGATTGAAGGCAAGAACGTTTTCTATTGGTTTCAGAACCATAAAGCTCGTGAGAGGCAAAAGAAAAGGTTTACAGTCGACATGGCCATGCAAAGAAGTGGAGCTGCTGCCTGGAAGTCTGACGACTCCATTCACACCAAATATACTAATATCAGTCCTGGGGTTTCTTGTCCTTCATCTCCTTCTTCACCTAATGTAGTTGGTGTTGGGCAGATGGGGAGCATCGGATATGGATCCGTACTCATGGAGAAAAGTTTCAGGGACTGTTCGATCTCCGCTGGTGGTGGTAGTGTTGGTGGGTCTATAAGCAACAATCTTGGTTGGGTCGGGGTTGATCCGTATTCATCATCTTACGCTTTTTTCGACAAGACCGTCAAAGAAGAAGCTCCAGAGATCGAAACTCTTCCTCTCTTTCCATTGCACGGTGAAAACATGGCCGGATTTTGCCCCGGAAACCCGGGGCCTGATGGGTACAACACCGGCTGGTATAGGCCCAACAATGAGAACGCTGGTTCTCGAACTTCGCTCGAGCTCAGCCTTAACTCCTACCCCGGCAGATCGTCGGATACTGACTGA 795 0.4843 MEPQQQQQQVQQQPQEESSSSSKSSFLCRQSSTRWTPTADQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTVDMAMQRSGAAAWKSDDSIHTKYTNISPGVSCPSSPSSPNVVGVGQMGSIGYGSVLMEKSFRDCSISAGGGSVGGSISNNLGWVGVDPYSSSYAFFDKTVKEEAPEIETLPLFPLHGENMAGFCPGNPGPDGYNTGWYRPNNENAGSRTSLELSLNSYPGRSSDTD* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02126 264 SMART HOX_1 30 98 IPR001356 GO:0003677
Eupl03g02126 264 MobiDBLite consensus disorder prediction 232 264 - -
Eupl03g02126 264 MobiDBLite consensus disorder prediction 235 264 - -
Eupl03g02126 264 Gene3D - 32 98 - -
Eupl03g02126 264 MobiDBLite consensus disorder prediction 1 32 - -
Eupl03g02126 264 SUPERFAMILY Homeodomain-like 25 100 IPR009057 -
Eupl03g02126 264 CDD homeodomain 33 95 IPR001356 GO:0003677
Eupl03g02126 264 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Eupl03g02126 264 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 12 258 IPR044555 GO:0003700|GO:0099402
Eupl03g02126 264 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02126 Eupl-Chr3 51094391 51096015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02126 26 217 Wox Gene Family AT2G17950 42.339 2.30e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl03g02126 Homeodomain 9.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02126 - - nnu:104605580 342.813