Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02109 ATGCAACGTCAAGCAGTTCCGCTTCCTCGGTCTGAGAAGTGCATTGTTGGAACGGGGTTGGAACGCCAAGCCGCTCTAGATTCGGGGGTTTCTGCTATAGCGAACTCGAGGGAAAGATCATTTATATCAATACTGACGATCATTTTATCAGAAGTAAGGTTGATTGGTGTGGAGGCTGCAGGTTTTGGCTTCGATAGTGGTAAACATGCCGCTACTTTGACAGAAGGGGAGGTAGGGATTCTGCATGGGGCTATGAGCTATTTATTGCAGGACGAAGACGGGCAAATAGTTGAGCCTCATTCTATTAGTGCTGGGCTGGCGCTACACGCACGAACGCTGGGTCCAAAGGGGTCAGACCCACATAAGGTTGCTGTGATTGGGGACAGAATCTGGGATCCTCTCAAGGACACTTCTGGTCCATTCCTTAACATCCTGATTAAGATCGTGGCAGTAAAATCATTGGTGTTTGCTCTGTACCCATGTGGGACTGCTTTTCAAATGGCTTTGAGATAG 513 0.4834 MQRQAVPLPRSEKCIVGTGLERQAALDSGVSAIANSRERSFISILTIILSEVRLIGVEAAGFGFDSGKHAATLTEGEVGILHGAMSYLLQDEDGQIVEPHSISAGLALHARTLGPKGSDPHKVAVIGDRIWDPLKDTSGPFLNILIKIVAVKSLVFALYPCGTAFQMALR* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02109 170 Gene3D - 44 122 IPR036052 -
Eupl03g02109 170 PANTHER TRYPTOPHAN SYNTHASE-RELATED 51 110 IPR023026 GO:0000162|GO:0004834
Eupl03g02109 170 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 1 36 - -
Eupl03g02109 170 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 50 109 IPR036052 -
Eupl03g02109 170 Gene3D - 1 31 - -
Eupl03g02109 170 Pfam Inorganic H+ pyrophosphatase 112 156 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02109 Eupl-Chr3 50807230 50818256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02109 113 157 Primary Pumps ATPases AT1G16780 57.778 2.69e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02109 K01696 - csin:114321678 109.383