Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02096 ATGGAAAGCACAAGCCAGTTTGATTCATTGGATGCCGATAATGAGATATTTGAAGCGGTTTCAGAATGTAGAGATAAAGTTGTAAGCCCTGATACTCATTCACCTAATGAAGTCACTTGTTCCAAACCATTCGAGGGAATGGAGTTCGACACTCTTCATAAGGCATTTCTTTTCTACAATGAATACGCTGCAATTGTGGGTTTCAGTGTACGGAAAGATAAAACTCGTAAATCAAATATTGATGGATCATTTCTTTTTCGCCGATTCTGTTGTTCGAAGGAAGGTTTCCCCCGAAAAAGCCTTGAAAATAATCATGACATATCAAGGCAATTGAAAGATGGTCTTCTAGTGAAGATGGAAGCACGACTTCCACCGGTTATGAGAGTAGGTCGCAGGGCGAAGTTAGAAATGGCAAGAAGGGCAAAAATTCAACAGGTAATGAGAGTAGGTTGCAATGCAAAGTTAGACATGAAAAGAATGGCCAACGGTAGATGGGTTGTACAAAAATTTGTTGAGGAACATAACCATGAATGTGTTAGCCTGGGGGAAACTCATTTGCTGAGGTCTCATAAATTCAGAAAATCTACTCAGGGACAAATTGGTATGCATTCAGTAGAGGAACTTCCTTCATCAGGCGATTTATGTGCACTTAATGAAGTCATCTGTAACAAACCATCTGTTGGGATGGAGTTTGACTCTCATCAAAAGGCATATCTTTTTTACAATGAATATGCTAGGATTGTGGGTTTCATTGTACGGAAAGATAAAACCCGTACCTCCAATATTGATGGATCGCTTCTTTTTCGTCGATTTTGTTGTTCAAAGGAAGGCCATCGTCGGAAAAGCTGTGAAAATGATAGCAATGTCCGGAAGCAAGTTAAAGATGGTGTTATAGTGAAGGTGGGGGTACGAATCAAACCAGTTACAAGAGTAGGTTGCAATGCGAGGTTGGAAGTGAAAAGAACAACTGATGGTAAATGGGTTGTTCAAAAATTTATTGAAGAACATAACCATGAATGTGCTCCATTGGGAGAAATGCATTTGCTGAGGTCTCATAAACACATACAATCAACTCAGGAACAGCTAGTTGATGCCATGAATGATGTGGGTACAAGACCAAAAAAAGTAATGTCCTACTTAGCAAGGGATGCTGATGGGAGTGAGAAGGTTGGCTTTGTTGAACCACGTTTAAGAAAGCAAGTAAATAAGAAAAGGAGGAAGAAACTGCAGAAGGGAGACGCACATGTCCTTCTCAATTACTTTAGGCAAATGCAAACGGAGAATCCATCATTCTTTTATGCCATGCAAGTTGATGAAGAGGATCAGATTCTGAACTGTTTTTGGGCCGATGCAAGGTCAAGGACGGATTTTGGTTACTTTGGGGATGTGATTTGTTTCGATACAGCCTATGGGACTAACAAGTATGGACGGCCATTTGCTCCAATTGTAGGTGTAAATCATCACCTACAAACAGTCCTGTTTGGTTGTGCAATACTTTTGAGTGAAACTGAGGAGTCGTTTGTTTGGTTGTTGGAGACATTGTTGAAAGCAATGTATGGGCATCATCCAGTTACAATAATTACCGATCAAGATGCAGAAATGGCGCAAGCAATTGAGCGAGTGTTACCAGGAACCCACCACCGTTTATGCTTATGGCATGTATTCCAGAATGCAGCTAAAAATTTGAGTCATCTGTACAATAAGGAGGACAACTTTAGTACAGATTTCAAGAAATGCATATACGAGCCCCAGTTGTGCGATGAGTTTGAGTCGAGGTGGGCAGCACTACTTGAGAAATATGAACTTTGTGATAATGAGTGGCTTGATAGTATATATAGGAAACGACACAAATGGGTTCCAGTCTACTCAAGGCACATCTTCCATGCAGATATGATGACGACTCAACGAGGCGAAAGTATATACTCCTTTTTTAATGAATACCTGAACAGGTCACTTCCTATTAATGAGTTTGTTAACCAGTATGAAAAGGCACTTGTTAATAGTCGTGAAAAGGTAAGTTATGAAGACTTTAAGTCCCATCAAACCAGGCCTATTTTGAAGTCGGATCTTCCAATGGAAAAACAAGCGGCTGACATTTACACAAGATCAATGTTTAAAGAGTTCCATAAGGAGTTTTGTGATAGTTTTAACTACATTGCTGTAGAAACAGAAACCTTAGGGACAAATAGAACATTTGTGGTGTCAAGGTGGGGGCAAAACAGTAACTGCCTTGTTAATTTCAACTCTTGTGATAATGATATTCGGGTGACTTGTAGTTGTCAAAATTTTGAGTTCATGGGCATTCTATGTAGGCATATCTTGAAAGTTCTTACAGTGACAAATGTTATGTTGGTTCCAGAGGTCTACATTAGAAAGAGGTGGACAAAAAGAGCCAAGTGTGGGGTTATCTTGAACGAAAGCGATAGGGAAATGCAAGCTGACTATCAAAAGTCATTAGCCTGGCGCTACAGTGATCTTTGCCATCTAGCTCTTAACCTTTCTGCTAAGGGTGCGATCTCTATGAAGGCTTATCAAATAGCCAAGCATAATATCGAAATGAAATTAAGAGAATTGGAAAAGGTTGCTGAGGAAGACATGATTATTACTCAGCCTAATATTGAGAGCATTAGAAGTTCACATTCTCCGGTCGAAGTTGTTAAAAATAGTGGGAGCTCAAATCGCTTTGCGAGTGAAGATAATCAAGCAATATCTTCCGCAAACCAAATAACGTCACATGACCCACCACGTGTGAGAACAAGAGGGCGACCACCGAAAAGAATTACGCCTTCATTGGGGGAGAACCAAAATAAAAAGAAAGCCAGGACAGGGCCTGAATCAAGCGAACAACATGGTATACCTTCACATTCCAGGAGAGGAGTGGAACCAAATGATCTATGCCATGTTGGAGGAGAAGGTGGACATGAGACTCAAAATCGAAGTAGATTATCGAATGTGGTTCCAAACATTTGTGTATATACATGTGCCCCTACTGGCCCCTCTGATGATCTGAACGACCAATATCACTCTTCTGACACTCCCAGTTTCGGGGACTCTTTTGCTGGCCTTTCATGCATCCAAACCTCTGAACCAAATATTTTTGACCTTAATCAGGTGGGCATGCGGAATTGA 3129 0.4059 MESTSQFDSLDADNEIFEAVSECRDKVVSPDTHSPNEVTCSKPFEGMEFDTLHKAFLFYNEYAAIVGFSVRKDKTRKSNIDGSFLFRRFCCSKEGFPRKSLENNHDISRQLKDGLLVKMEARLPPVMRVGRRAKLEMARRAKIQQVMRVGCNAKLDMKRMANGRWVVQKFVEEHNHECVSLGETHLLRSHKFRKSTQGQIGMHSVEELPSSGDLCALNEVICNKPSVGMEFDSHQKAYLFYNEYARIVGFIVRKDKTRTSNIDGSLLFRRFCCSKEGHRRKSCENDSNVRKQVKDGVIVKVGVRIKPVTRVGCNARLEVKRTTDGKWVVQKFIEEHNHECAPLGEMHLLRSHKHIQSTQEQLVDAMNDVGTRPKKVMSYLARDADGSEKVGFVEPRLRKQVNKKRRKKLQKGDAHVLLNYFRQMQTENPSFFYAMQVDEEDQILNCFWADARSRTDFGYFGDVICFDTAYGTNKYGRPFAPIVGVNHHLQTVLFGCAILLSETEESFVWLLETLLKAMYGHHPVTIITDQDAEMAQAIERVLPGTHHRLCLWHVFQNAAKNLSHLYNKEDNFSTDFKKCIYEPQLCDEFESRWAALLEKYELCDNEWLDSIYRKRHKWVPVYSRHIFHADMMTTQRGESIYSFFNEYLNRSLPINEFVNQYEKALVNSREKVSYEDFKSHQTRPILKSDLPMEKQAADIYTRSMFKEFHKEFCDSFNYIAVETETLGTNRTFVVSRWGQNSNCLVNFNSCDNDIRVTCSCQNFEFMGILCRHILKVLTVTNVMLVPEVYIRKRWTKRAKCGVILNESDREMQADYQKSLAWRYSDLCHLALNLSAKGAISMKAYQIAKHNIEMKLRELEKVAEEDMIITQPNIESIRSSHSPVEVVKNSGSSNRFASEDNQAISSANQITSHDPPRVRTRGRPPKRITPSLGENQNKKKARTGPESSEQHGIPSHSRRGVEPNDLCHVGGEGGHETQNRSRLSNVVPNICVYTCAPTGPSDDLNDQYHSSDTPSFGDSFAGLSCIQTSEPNIFDLNQVGMRN* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02096 1042 MobiDBLite consensus disorder prediction 878 914 - -
Eupl03g02096 1042 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 196 IPR031052 GO:0006355
Eupl03g02096 1042 Pfam SWIM zinc finger 757 779 IPR007527 GO:0008270
Eupl03g02096 1042 SMART 26again6 756 783 IPR006564 GO:0008270
Eupl03g02096 1042 Pfam FAR1 DNA-binding domain 58 179 IPR004330 -
Eupl03g02096 1042 Pfam FAR1 DNA-binding domain 240 341 IPR004330 -
Eupl03g02096 1042 MobiDBLite consensus disorder prediction 938 964 - -
Eupl03g02096 1042 ProSiteProfiles Zinc finger SWIM-type profile. 743 781 IPR007527 GO:0008270
Eupl03g02096 1042 Coils Coil 841 864 - -
Eupl03g02096 1042 MobiDBLite consensus disorder prediction 878 980 - -
Eupl03g02096 1042 Pfam MULE transposase domain 463 557 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02096 Eupl-Chr3 50540267 50543840 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl03g02096 FAR1 2.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02096 - - psom:113288819 1395.95