Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02090 ATGGTGAGATCAACGAGTTCTTGCTTAAAGATCATTACATGTGGCAGCGATTCTGTTGACAAAGATGATCTCGAACAAACCGAGAGCAAAGGTTCAACAGACAAGCGTGGTTGGAGTTTCCGGAAGAGATCTGCCAGGCATCGAGTGCTAAGCAACACTGTGATCTTAGACAGCCCATCTACTGAAAATAAGGAGAGCCCAGAATCAACTAGTATTGACTTCCATGCACAGACTAACCCTGTTGTTTCTGAGAAAATCTCTGTATCTCAGTGGACAGATGAAACGCCTTCTTTGTCAACTGCTCTGAACTCGAAAGTGCCCAATCCCTTAATTGCGACAGAGCATGCCTGTAAAAGTGATCCCTTAATTTCCACAGAGATTGACAATAAGATTGATCCTTTAGTTATCACGGAGAATGCCAGTAAGAGTGATCCCAACCTAGAGGAATCTGTTGCCATTATCATGCAGGCTGCTATCAGAGGATACTTGGGTCAGAGGGCGCTCTTGAAGCTGAAGAATGTAATTAAGTTGCAAGCTGCTGTCCGTGGGCATTTGGTCAGGAGGCAGGCCGTGGGAACTCTACGTTGTGTTCAAGCTATTGTCAAAATGCAGGCTCTTGTACGTGCTCGCCATGCTCGTATGTCACTACAACGGTCAGTTATCGAAGAGAAGCTTGATGGGAAGCATGAGAGAAATAGCCAGAGCATTAACCCTTTGGGAAAAGAAAATTCAGGACCGAAAGCAAACAGAAATTACTCTTCTACTGAGAAGTTGCTTAGCAATGGGTTCGCTCGTCAGCTCTTGGAATCAACACCAAAGAAAAAACCGATTCACATCAAATGTGATCCTTCAAGACCTGATTCTGCGTGGAAATGGTTGGAGAGGTGGGTGTCTGTATCATCATCATCAGACTGCGCTCAGCCACAGAAACCACAGTTTGGTCCAGAGTCTCAGGAACAAGGAAAAAGTATTGATATTGCTACTTCTGAAATAGGAACTGAAATTCCAACTGAAGTTATCTCCGAGCCTCTGGATTTGAAGTCCAGTATTAGGGAAACAACACTGTCGCTTGAGGGTGAAGAGAATGTGATCACTTATGATGCAGGTAACTTTGATTTTCAGGCTTGTCGTTCAACCTCTTCTTCAATAAGAGATGATCTGCAGCAGCCCTGTCTTGAGGATATGAGTTTTAGCAAAGCACAAGAGACCTCTTCAGAGATAGATAATAGTCAAACAGAGGTGCTATCCGATGCCGCTGCTTCTGAAAGAGTACCAGGTTCCATCTCTCATAAGCCTGAGGCAGACATTGAACAACCAAAACGTTCTGTGAAAAGGGTTGCCTCTGAACAACCAGAAACGGAGAGCAAGAAATTTTTATTTGGGTCAAGAAAGGCATCCAATCCTGCATTTGTTGCTGCTCACTCAAAATTTGAAGAGCTGAGTTCAACACCCACGTCAAGTAGGTCGATCAGTTCTACTTATCTAGATGTTGGAGTAGAATCAAAATTCGACAGGCTTTCGTCTCCAGTAGATTCTGTCTCAGGGACCAAGGAACTTAGCGTGACAGAAAGTTTGATCTCTCATGAGCCAAGAGTTCCTGTTGGGGGTTCGGAATGTGGCACTGAACTTTCTATTTCTTCCACTCTTGATTCACCAGATAGAGTTGAAGTAGGTGGGGACTTCAAGCATGATGCCGAAGTCATGGAAAAAGTGACTTCTGAACCAAATGGAACCACCATTAATGCATCAAATCTTGAAAATCTAGATACTGAAGCCAAAAACATTTCCTCCGCATCACAGGCCAATATATCCTACTGCAGCTCCATTCAGTCGGGGAACCTTGAGGATGCTTACGGAGAATCTGTTTATTCAGTTGGAGCTGTTGACTCCCCAGGGATAGAGCAACAGCCAACAGAGAGACGTGCATTGGATATGCAGAGCCAATTCAATACTGTAACAGATCAAAAAGATTACAGGTCATCGCCAGAAGGATCTCCAAGAAGTCATATAACGGCCCCTGAATCGCATGGGACACCATCAAGTCAGGTATCAGTGAAGACTAAAAGGAATAAATTGAATAAAAGTGGGTCTACCCAAAACAGAAAGTCTCAATCAGCAGGTAAGAGGTCCCCATCAAATCCAAACAGTGATTCAGGTGCAAGAAGTAGTACGGAGCAATTGCCGAAGGACCCAAAAAATGGGACGAGGCGCAACTCATTTGGTTCGGCGAGACCCGATAATGTTGACCAGGAGCCAAGAGATAGTAGTAGTAATTCCATTCCCAATTACATGCAAGCCACAGAGTCTGCAAGGGCCAAGGCCTATGCGAACAACTCTCCAAGGTCGAGCCCAGACATGCAAGACAAGGATATTTACATCAAGAAGCGACATTCCCTACCCGGTGCAAACGGAAAGCAGGGCTCCCCTCGAATGCAGCGGTCAATGTCCCAAGCGCAACAGGGTGCAAAGGGAAATGAATTTTCCTCTGGTTTGCATATTGGAGTATCCGGTGTAGCATTTGGAAAGCGCAGTGGAATGGGGATTTCATGTACATTTATAGTATTTGAAAGGTCCTGCCCAGAGGCAACGCCAATACTGACGTCGCCACCGACGGAGAGCAGCTTGACGGATATTCTCGTGAGGAAACCCTCTTCTTCTTCAGTTCCAGGTACTTTAAATCCCAAGGTGCTATTGGAACTCTTCTCCATGTATCGTGATTGGCAGGAGGATAAGGCCAAAAGAATTAGCCAGAGACAGGAGGAGATAGAAAACAAGATAGAAGTTGCAGACGCTTTGGCAGTTAAACTTCTTCAGCGTTTTAATTACTCTGTGTCAGCTATGAGAACGAATGCACAACATCTATCAGAAGTTCACCCATTGCAGGTGGAGGTCGGTGAGCTGAAAGGTAGACTGACTGAGGTAATAAGCAATTGCGATGCATTATGCAAGCGAATTGTTGCAGAGGGTCCAGAAACGCTCCGATCATCCATCAAGCCATTTGATGCGACCGCTGCTGGTATAGAACCTGGACAAAAGTCGTCTTCGTCCTTGCAAAGAGTTTGA 3063 0.4512 MVRSTSSCLKIITCGSDSVDKDDLEQTESKGSTDKRGWSFRKRSARHRVLSNTVILDSPSTENKESPESTSIDFHAQTNPVVSEKISVSQWTDETPSLSTALNSKVPNPLIATEHACKSDPLISTEIDNKIDPLVITENASKSDPNLEESVAIIMQAAIRGYLGQRALLKLKNVIKLQAAVRGHLVRRQAVGTLRCVQAIVKMQALVRARHARMSLQRSVIEEKLDGKHERNSQSINPLGKENSGPKANRNYSSTEKLLSNGFARQLLESTPKKKPIHIKCDPSRPDSAWKWLERWVSVSSSSDCAQPQKPQFGPESQEQGKSIDIATSEIGTEIPTEVISEPLDLKSSIRETTLSLEGEENVITYDAGNFDFQACRSTSSSIRDDLQQPCLEDMSFSKAQETSSEIDNSQTEVLSDAAASERVPGSISHKPEADIEQPKRSVKRVASEQPETESKKFLFGSRKASNPAFVAAHSKFEELSSTPTSSRSISSTYLDVGVESKFDRLSSPVDSVSGTKELSVTESLISHEPRVPVGGSECGTELSISSTLDSPDRVEVGGDFKHDAEVMEKVTSEPNGTTINASNLENLDTEAKNISSASQANISYCSSIQSGNLEDAYGESVYSVGAVDSPGIEQQPTERRALDMQSQFNTVTDQKDYRSSPEGSPRSHITAPESHGTPSSQVSVKTKRNKLNKSGSTQNRKSQSAGKRSPSNPNSDSGARSSTEQLPKDPKNGTRRNSFGSARPDNVDQEPRDSSSNSIPNYMQATESARAKAYANNSPRSSPDMQDKDIYIKKRHSLPGANGKQGSPRMQRSMSQAQQGAKGNEFSSGLHIGVSGVAFGKRSGMGISCTFIVFERSCPEATPILTSPPTESSLTDILVRKPSSSSVPGTLNPKVLLELFSMYRDWQEDKAKRISQRQEEIENKIEVADALAVKLLQRFNYSVSAMRTNAQHLSEVHPLQVEVGELKGRLTEVISNCDALCKRIVAEGPETLRSSIKPFDATAAGIEPGQKSSSSLQRV* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02090 1020 PANTHER EXPRESSED PROTEIN 862 1008 - -
Eupl03g02090 1020 Gene3D - 148 195 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 397 459 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 640 745 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 397 417 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 428 459 - -
Eupl03g02090 1020 SMART iq_5 170 191 IPR000048 GO:0005515
Eupl03g02090 1020 SMART iq_5 195 217 IPR000048 GO:0005515
Eupl03g02090 1020 SMART iq_5 147 169 IPR000048 GO:0005515
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 223 253 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 797 825 - -
Eupl03g02090 1020 Pfam IQ calmodulin-binding motif 172 189 IPR000048 GO:0005515
Eupl03g02090 1020 Pfam IQ calmodulin-binding motif 152 167 IPR000048 GO:0005515
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 19 38 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 232 253 - -
Eupl03g02090 1020 Coils Coil 912 932 - -
Eupl03g02090 1020 ProSiteProfiles IQ motif profile. 170 199 IPR000048 GO:0005515
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 805 825 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 768 785 - -
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 768 787 - -
Eupl03g02090 1020 ProSiteProfiles IQ motif profile. 198 224 IPR000048 GO:0005515
Eupl03g02090 1020 MobiDBLite consensus disorder prediction 629 761 - -
Eupl03g02090 1020 ProSiteProfiles IQ motif profile. 148 176 IPR000048 GO:0005515
Eupl03g02090 1020 Pfam Protein of unknown function (DUF4005) 716 819 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02090 Eupl-Chr3 50448985 50465778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02090 134 827 IQD Protein Family AT1G19870 37.115 5.86e-101 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02090 - - nnu:104607486 943.725