Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02088 ATGGATGGATATTCGATCTCCATGAATGGAGCTTCGACGGAAGTCGAAGCGAAGGTCTCAGAAAATTTAGTTCCTTCAAATCCAGTCGAAGTTCAATTAAAACCAGAAGAACTCGTCGCCAAAGCAATAGCACCTGTTAAGAGAGAGTACCTTCGACCTCCACCTCTAAGGCCTTGTTCCAACGACGCTAGCGATGGAGGAGTTGCGAACAAGAACGCCATTTCTTCAAACGTCGTCAAGGAGAAGAAATCAAAGAGGCAGTTGAAGAGAGAACGCCAACAGGAACAGAAATCCACGTTACATATATGTCCTGAGGTAGCGAAGACTGGAAATGTCAGTTCATGTCGTTATGATCGTAATTGCCGTTTCAGCCACGACTTGGAAGCCTTTAAGGCTCAGAAACCAGCAGATCTAGAGGGAAATTGTCCTTTCCTCAGTCTCGAAGGGCCATGCCCTTATGGATTGGCGTGTAGATTTTCAGGTACACATAAAGACAGCATTCCTGCAGAGGCTTTGAATTTTCAGAAGAAAAGCCCTGAAATGAACGGGCTGAACAAAGATGTCCAGAAGCTTTTATGGAAGAGTAAAATGAGCTTTCCCAGGGCTGACGCTCAGCTCAAACTCCTCGGCCTTTTGGTGAAGGACAATTCAAAGACAAAAAAGGCAGAAATTAAAGAGGAGGAAGGTGATCAAGCTATTCTGAACGGGTCTCACGCTGCTCATGAAAATGACGGTGTTGAAGTGGTTTGTGATTCTGTTAATAAAATCGAGTGCTCTCCAGAAGCAATGGTGGAAGAAGAGTTCGTCAATGATGCAGTTGTAACTGATGACCCTCGACCCCTGAAGAAGGCAAAAAGTCCAGTTAATGAAAAATGTTGCTCCGATCAAATGGATAATGGCTCGAGCCCCCTGGAAAAAGGTTTTGAGAAAATATGCACACACACCGAAGTAGAAACCACACAAACTGATAGTTTTCTCTCAGAAGCTGATATGAGCCTGAAATTACACCCACGCGAAAAGAAGCTTATTGACTTCAGAGGGAAGCTTTATCTTGCACCTCTGACCACTGTTGGGAATCTTCCTTTTCGAAGGGTTTGCAAGGTGCTTGGAGCAGATATAACATGTGGTGAAATGGCCATGTGTACTAATCTCTTGCAGGGGCAAGCTTCAGAATGGGCACTGCTGAGACGGCATTCATCTGAGGATCTGTTTGGTGTACAGATATGTGGGGCATATCCAGATACTGTAGCACGTACTGTTGAACTTATAGACCGTGAGTGTACGGTTGATTTTATTGACATAAATATGGGGTGCCCAATTGATATTGTTGTTAACAAAGGTGCCGGATCTTCCCTTCTTACAAAACCTATGAGGATGAAGAACATTATACAGGCAGCTTCTGCCATTGTGGAGAAACCTGTAACTGTCAAGGTGCGAACAGGTTATTTTGAAGGTAGAAATCGCATTGATTCATTAATTGTAGATATTAACCACTGGGGAGCCAGTGCTTTAACAATACATGGCCGGTCACGTCAGCAGCGCTATAGCAAACTTGCTGATTGGGACTACATATATCAATGTGCAAGAAAGGCCCCTGATATTTTGCAAGTCCTGGGAAATGGAGATGTATTTTCATACTTAGACTGGAACAAGCACACGTCTGACTGCCCGGAGCTTTCTGCATGCATGATTGCTCGAGGATCACTAATTAAGCCTTGGATATTTACTGAGATCAAGGAACATAGGCACTGGGACATCAGTTCTGGTGAACGATTGAATATTTTAAAAGATTTTGTCCATTTTGGCCTTGAACACTGGGGTTCTGATACCAAAGGAGTGGAGACAACTAGGCATTTCTTGCTTGAATGGCTCAGCTACACGTATAGATACATCCCTGTTGCTCTATTAGATGTTATCCCACAACGTCTGAACTGGCGTCCACCCAGCTACTACGGTCGGGATGATCTTGAGACACTAATGGCCTCTGATTCTGCGGCTGACTGGATTCGGATCTCCGAGATGTTGCTTGGCAAGGTTCCGGCTGGCTTCACGTTTGCTCCAAAACATAAATCCAATGCTTACGACAGAGCAGAAAATGGATGA 2103 0.4441 MDGYSISMNGASTEVEAKVSENLVPSNPVEVQLKPEELVAKAIAPVKREYLRPPPLRPCSNDASDGGVANKNAISSNVVKEKKSKRQLKRERQQEQKSTLHICPEVAKTGNVSSCRYDRNCRFSHDLEAFKAQKPADLEGNCPFLSLEGPCPYGLACRFSGTHKDSIPAEALNFQKKSPEMNGLNKDVQKLLWKSKMSFPRADAQLKLLGLLVKDNSKTKKAEIKEEEGDQAILNGSHAAHENDGVEVVCDSVNKIECSPEAMVEEEFVNDAVVTDDPRPLKKAKSPVNEKCCSDQMDNGSSPLEKGFEKICTHTEVETTQTDSFLSEADMSLKLHPREKKLIDFRGKLYLAPLTTVGNLPFRRVCKVLGADITCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIDRECTVDFIDINMGCPIDIVVNKGAGSSLLTKPMRMKNIIQAASAIVEKPVTVKVRTGYFEGRNRIDSLIVDINHWGASALTIHGRSRQQRYSKLADWDYIYQCARKAPDILQVLGNGDVFSYLDWNKHTSDCPELSACMIARGSLIKPWIFTEIKEHRHWDISSGERLNILKDFVHFGLEHWGSDTKGVETTRHFLLEWLSYTYRYIPVALLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPAGFTFAPKHKSNAYDRAENG* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02088 700 Gene3D - 92 172 - -
Eupl03g02088 700 Pfam Dihydrouridine synthase (Dus) 351 598 IPR035587 -
Eupl03g02088 700 SUPERFAMILY FMN-linked oxidoreductases 348 661 - -
Eupl03g02088 700 Gene3D Aldolase class I 344 586 IPR013785 -
Eupl03g02088 700 MobiDBLite consensus disorder prediction 78 97 - -
Eupl03g02088 700 ProSitePatterns Uncharacterized protein family UPF0034 signature. 432 450 IPR018517 GO:0008033|GO:0017150|GO:0050660
Eupl03g02088 700 MobiDBLite consensus disorder prediction 54 97 - -
Eupl03g02088 700 CDD DUS_like_FMN 348 583 IPR035587 -
Eupl03g02088 700 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 93 173 - -
Eupl03g02088 700 Coils Coil 78 98 - -
Eupl03g02088 700 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 34 694 - -
Eupl03g02088 700 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 344 586 - -
Eupl03g02088 700 ProSiteProfiles Zinc finger C3H1-type profile. 102 128 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl03g02088 Dus 2.7e-51 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02088 K05544 - nnu:104602061 1108.2