Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02085 ATGGAAGACAGTGGCCAGCGTGAAAATGGGAGACACAAACAGGATCAGTACAAATCGATTCACACTCAGTGGATGATTCCCCAACATCTGATGAAGGACCAGCATGGCTTGACAATGAAGTTCATGAGCATCTTAACTGAGAGGGACACCGCTATCCAAGAACGGAACTTGGCCCTCTCTGAAAAAAAGGCAGCCTTGGCTGAGCGAGATATGGCAATCCTGCAGCGAGATGCAGCCATTAGCGAGCGAAATAACGCTTTAGTGGAACGAGACAATGCCATTGCAGCCTTTGAGTACCGGGACAATACTGCCATGAATGGCAGCAGTGCACCCACATGCCCACCAGGATGTGGAGTCCCACGTGGGACAAAGCACATGCACCACTCGCAGCACGTGCATCATCCGCCCCACTTGGCTGAAGCTCCTTACAATTCAAGGGAGATGCACATTAGTGATGCCTTCCCAATATCAGCAGCTGCTTCCGAGGCTGTCAAGCCCCGGCGAGCTAAGCGAATGAAAGAGACTAAGAGTGTGTCATCCAAAAAGGCGTCAAAGACATCAAGGAAGGGTAAGAGGGGTGGCGAGGACTTGAACAAACAGGCCACCGTTGCCAAGCCGCATGAGTGGAAGAGTGGGCAGTTTATGGGTGGCAGTGGTGAAGATCTGAACAAACAGCTCGATATGTCGAAGCCCGAATGGAAGGATCAGGACCTAGGTTTGAATCAGGTCACTTTTGATGACTCATCCATGCCTGTGCCTGTTTGCTCATGCACCGGTGCCCTCCAACAGTGCTACAAATGGGGGAAAGGAGGTTGGCAATCTGCCTGCTGCACAACCACCATGTCAATGTATCCATTACCGGTGATGCCCAACAAGCGACATGCCCGCATTGGTGGCCGAAAGATGAGTGGCAGTGCCTTTACAAAATTGCTCAGCCGGTTGGCTGCGGAGGGTCATGATCTGTCAACTCCTCTTGATCTCAAGGATCACTGGGCCAAACATGGGACGAATCGCTACATCACCATCAAGTAG 1032 0.5165 MEDSGQRENGRHKQDQYKSIHTQWMIPQHLMKDQHGLTMKFMSILTERDTAIQERNLALSEKKAALAERDMAILQRDAAISERNNALVERDNAIAAFEYRDNTAMNGSSAPTCPPGCGVPRGTKHMHHSQHVHHPPHLAEAPYNSREMHISDAFPISAAASEAVKPRRAKRMKETKSVSSKKASKTSRKGKRGGEDLNKQATVAKPHEWKSGQFMGGSGEDLNKQLDMSKPEWKDQDLGLNQVTFDDSSMPVPVCSCTGALQQCYKWGKGGWQSACCTTTMSMYPLPVMPNKRHARIGGRKMSGSAFTKLLSRLAAEGHDLSTPLDLKDHWAKHGTNRYITIK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02085 343 PANTHER - 14 343 IPR010409 -
Eupl03g02085 343 Pfam GAGA binding protein-like family 1 343 IPR010409 -
Eupl03g02085 343 Coils Coil 57 84 - -
Eupl03g02085 343 MobiDBLite consensus disorder prediction 159 199 - -
Eupl03g02085 343 SMART GAGA_bind_2 1 343 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02085 Eupl-Chr3 50329568 50330816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02085 1 343 BBR or BPC Transcription factor family AT2G21240 47.126 7.40e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Eupl03g02085 GAGA_bind 2.9e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02085 - - nnu:104602053 506.523