Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02081 ATGTCGCCATTTGATTTTGGTGCTGTGGTGGTGGTGATGATGGAGTCAATGGAGTCGTGCGTCCCACCAGGCTTTCGGTTTCATCCGACGGACGAGGAGCTAGTTGGGTATTATCTGAAGAAGAAGGTGGCGTTGCAGAAGATCGATCTCGACGTTATCAGAGACATCGATCTCTACCGAATCGAACCATGGGATCTCCAAGATCGGTGTCGAATCGGGTACGAGGAGCAAAATGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCAACTGGGACGCGAACGAATAGGGCGACACTGGCCGGGTTTTGGAAGGCGACGGGTCGCGACAAGGCGGTGTATGAAAAGATGAGGCTCATAGGCATGAGAAAGACCCTTGTCTTCTACAAGGGTAGGGCACCCAATGGACAGAAAACTGACTGGATCATGCATGAGTACAGGCTCGAGTCCGATGAGAATGGACCTCCACAGGAAGAAGGATGGGTCGTCTGCCGAGCATTCAAGAAACGAATTAGCTGCCAAACAAGAAGCAACGAAGGGTGGGATTCAAGTTATTTCTATGATGAGCCAAGTGGGGTCAGCTCCATTGTGGATCCTACTGACCATATCTCAAGAAATCCCCAGAAATTCGTCTGTAAGCAGGAAATTGAAGCGGATAAGTTGAGGTTTTTGCACTCTGTTAATCACTTTGAAGAAGACAATTTGAAGTTCTTGCACTCTGATCACTTTGTACAGCTTCCTCAGCTAGAGAGTCCCTCTCTACCATTAATAAAGAGGCCGAGCTTATTGTCGCTAGTGTCGGAGAATATCGAAGATGAAGAACTTATAAGAGGGTGTAACAACAATGAGAAAGTGACAGATTGGAGGGCCCTTGATAAGTTTGTTGCTTCTCAGTTGAGTCAGGAAGATAGAAATGATGGTGAAGGGGTCTCTAACTTTGGAACTCATTATAATTCTGATATGGCGTTGCTTTTACTGCAGAGTAGTAGGGAAGAAGGGAACAAGCAGTTGAATGGGTTCTTGAGTTCAAGTTCAGACTGTGACTTTGGTATTTGCATATTAGAGAAATGA 1074 0.4581 MSPFDFGAVVVVMMESMESCVPPGFRFHPTDEELVGYYLKKKVALQKIDLDVIRDIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAVYEKMRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRISCQTRSNEGWDSSYFYDEPSGVSSIVDPTDHISRNPQKFVCKQEIEADKLRFLHSVNHFEEDNLKFLHSDHFVQLPQLESPSLPLIKRPSLLSLVSENIEDEELIRGCNNNEKVTDWRALDKFVASQLSQEDRNDGEGVSNFGTHYNSDMALLLLQSSREEGNKQLNGFLSSSSDCDFGICILEK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02081 357 Gene3D NAC domain 30 173 IPR036093 GO:0003677|GO:0006355
Eupl03g02081 357 Pfam No apical meristem (NAM) protein 22 149 IPR003441 GO:0003677|GO:0006355
Eupl03g02081 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 239 - -
Eupl03g02081 357 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
Eupl03g02081 357 ProSiteProfiles NAC domain profile. 21 170 IPR003441 GO:0003677|GO:0006355
Eupl03g02081 357 FunFam NAC domain-containing protein 30 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02081 Eupl-Chr3 50271180 50273527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02081 14 356 NAC Transcription Factor Family AT2G18060 60.789 3.80e-156 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl03g02081 NAM 3.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02081 - - nnu:104607494 586.26