Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02071 ATGACTACTATGACTCTTCTCTTCCTCTTCCTGGTTCTCTCCACCACATTCTTATCCTGCGCCCAACGTAGCGCTGAAACCCTAGCTGAGATTCAAGCACTGACATCCTTCAAGCTTAACCTACACGATCCTCTGGATGCATTGAACGGATGGGATTCATCTACACCATCCGCTCCCTGTGACTGGCGAGGCATACTATGCTACAACGGCAGAGTTCGGGAACTCCGCCTTCCTCGCCTCCAACTTGGTGGCCGACTCACTGATCACCTCGCTAACCTGCGCGAGTTGCGCAAGCTTAGCCTGCGCTCCAACTTCTTAAACGGCACCATCCCTTCTTCCCTCTCCAAATGCACTCGTCTACGAGCCGTGTTTCTTCAGTACAACTCCTTTTCCGGCCGTCTCCCGCCGGAGGTTGCAAACCTCACCGATCTCCAAGTCCTCAACGTGGCTCAGAATCTTCTCTCCGGTGGAATCTCCGGCGATATACCCCAGAATCTCCGGTACCTCGATCTTTCGTCGAATGCCTTATCCGGTGAGATTCCGCGGAACTTCTCCTCCACGTCTCGGATTCAGCTCATAAACCTCTCGTTCAATCGGTTCACCGGAGAGATCCCTGCGAGCTTTGGAGAGCTTCAACAACTTCAATATCTATGGTTGGATTGGAATCTATTGGAGGGGACTCTGCCTTCAGCGCTTGCAAATTGTTCTTCGCTCGTGCATTTGAGCGTTCAAGGCAATGCGCTTCGAGGTTTGATTCCGGCGGCGATCGGTGAGCTTCCGAGACTTCAAGTGCTTTCGCTGTCACATAATAACCTCTCTAGTTCGATTCCATCTTCTATGTTCTGCAACGTTTCCATTAATCCTCCATCATTGAGGATCGTTCAACTAGGGTTTAATGCGTTCACGGACCTTGTTCCGCCGGCAAAAGCTACGTTTTTTAGCAGTTTGCAGGTTTTGGATCTTCAGGAGAATCGAATACAAGGTGTGTTTCCGTCGTGGTTGACAAATGTGTCAACACTCGTTGTGTTGGATCTTTCGGGGAACTCGTTCTCTGGTTCGATTCCTGTTGGAATCAGTAGCCTCTTGATGTTGGAGGAACTGAGAGTGGCGAATAATTCGCTGAAGGGTGAAGTTCCAGCCGAGATTCAGAAGCGTAGTTCATTACGTGTTCTTGATCTTGAAGGGAATCGTTTTTCCGGCGAGGTTCCTGCATTCTTGGGGGAGCTAAGGAGTTTGACGATCTTGTCTCTTGGGGGAAATCTTTTCTCCGGTCCGATTCCAGTTAGTTTTGGAAATCTATCTGAGCTGGAAACGCTGAATCTGAGACAGAACAATCTGATTGGGAACGTGCCTGGTGAGCTGCTGCGATTGAACAATTTGACTACTCTGAACCTCAGCGGAAACAAATTTTCTGGTGAAGTTCCGTCAAATATTGGGGATTTAAGGGGTCTACTGGTTTTGAATATGAGCGGTTGTGGATTTTCGGGAACGATTCCTGCAAGTATTGGAAATCTGTTGCACCTCACAACGTTGGATTTGAGCCGTCAGAACATCTCTGGTGAGGTGCCATTTGAGCTTTCAGGCTTGCCTAATCTGCAAATTATCTCTCTGGAAGAGAACATACTCTCGGGGGAAGTTCCCGAAGGTTTCAGCAGCTTAATGAGCTTGAGGTATCTGAACTTAACTTCCAATTCCTTGTCCGGTGAGATTCCAGCAACCTACGGCTATCTCCGATCGTTACTTGTTCTGTCCCTATCCAACAATCACATTTCGGGCATTATTCCAGCAGAGCTCGGCAACTGTTCCGATCTCGAAGACCTTCAGCTCCGTTCAAATCGATTGACCGGTACCATACCGGCTGATTTTTCTCGTCTTTCCCATTTGAAGGAGCTCGACCTGGGTCAGAATAATTTCTCGGGTGAAATCCCAAAGGAAATCTCTGAATGCTCGTCTCTAACTTCTCTATTATTGGATGGGAATCGACTTACAGGCAACATACCAGATTCATTGTCGAACCTATCAAACCTAACCATGCTGGATCTCTCGGCAAACAACTTGAGTGGGGTGATTCCAGAGAATTTGACAAACATATCTGGCTTGAGATACTTAAATGTGTCGCGGAATAACCTTTCAGGTGAGATTCCAGCAATGCTGGGCTCCCGATTCAGCAATCCCTCTGCATTTGCTATGAATCAAAATTTATGCGGAAGGCCATTGAATAGGAAATGCAAGAATAAACCCAACGCTAACAGCAAGAAGAGGAAGAAGCTGATTTTCTTGATAGGTGTTGTGGTAGCCGGAGCTTGCCTTGTTTCATTGTGTTGTTGCTGCTATGTTTTCAGCCTCCTACGATGGCGCAAGCGACTCCGAGAAGCTGGAGCAGGGGAGAAGAAGCCGAGCCCTGCACGTGCTAGTTCGGGTACAGATCAGGGTCGTGGCAGTGGGGATAATGGGGGGCCAAAGCTTGTTATGTTCAACAACAAGATCACCTATGCAGAGACAGTAGAGGCAACAAGGCAATTTGATGAGGAGCATGTGCTGAACAGGGGACGGTATGGGCTAGTTTTCAAGGCCTGCTTCCAGGATGGAATGGTGCTTTCAATCCGTCGCCTCCCGGATGGATCAGTTGAGGAGGGGACTTTCCGGAAGGAATCCGAGTCGCTCGGGAAGGTTAAGCACCGAAACCTAACAGTCCTCCGTGGCTACTACTCAGGCCCACCCGACGTCCGGCTCCTTGTCTATGACTACATGCCCAATGGCAACCTTGCCACTCTCCTCCAGGAAGCATCTCACCAGGATGGTCATGTTCTCAATTGGCCGATGCGCCATCTAATTGCCCTCGGGGTCGCCCGAGGTCTAGCGTTCCTGCATACAGCTTCCATGGTTCATGGTGATATCAAGCCACAGAATGTTCTATTTGATGCTGACTTTGAAGCTCACCTCTCTGATTTCGGGCTTGATCGTCTAACAGTGGCAACTCCAGCTGAAGCATCTACATCTGCTACACCAGTAGGGTCCCTCGGATATGTGTCGCCGGAGGCTGCATTAACTGGGCAAGCTACTAAGGAATCTGATGTATACAGTTTCGGGATTCTATTGCTGGAGCTATTAACAGGTAGGAGGCCTGTGATGTTCACACAGGATGAGGACATTGTGAAGTGGGTGAAGAGGCAGCTACAACGGGGTCAGATATCGGAATTGCTCGAGCCCGGCCTGCTCGAGCTCGATCCTGAGTCTTCTGAATGGGAAGAGTTCTTGCTAGGGGTGAAGGTAGGGCTACTATGCACATCACCGGACCCACTTGATCGACCGTCAATGGCCGACATCGTCTTCATGCTCGAAGGCTGCCGGGTTGGGGCTGACATTCCCTCCTCCGCTGATCCCACCTCTCAACCTTCTCCGGCATAA 3408 0.4962 MTTMTLLFLFLVLSTTFLSCAQRSAETLAEIQALTSFKLNLHDPLDALNGWDSSTPSAPCDWRGILCYNGRVRELRLPRLQLGGRLTDHLANLRELRKLSLRSNFLNGTIPSSLSKCTRLRAVFLQYNSFSGRLPPEVANLTDLQVLNVAQNLLSGGISGDIPQNLRYLDLSSNALSGEIPRNFSSTSRIQLINLSFNRFTGEIPASFGELQQLQYLWLDWNLLEGTLPSALANCSSLVHLSVQGNALRGLIPAAIGELPRLQVLSLSHNNLSSSIPSSMFCNVSINPPSLRIVQLGFNAFTDLVPPAKATFFSSLQVLDLQENRIQGVFPSWLTNVSTLVVLDLSGNSFSGSIPVGISSLLMLEELRVANNSLKGEVPAEIQKRSSLRVLDLEGNRFSGEVPAFLGELRSLTILSLGGNLFSGPIPVSFGNLSELETLNLRQNNLIGNVPGELLRLNNLTTLNLSGNKFSGEVPSNIGDLRGLLVLNMSGCGFSGTIPASIGNLLHLTTLDLSRQNISGEVPFELSGLPNLQIISLEENILSGEVPEGFSSLMSLRYLNLTSNSLSGEIPATYGYLRSLLVLSLSNNHISGIIPAELGNCSDLEDLQLRSNRLTGTIPADFSRLSHLKELDLGQNNFSGEIPKEISECSSLTSLLLDGNRLTGNIPDSLSNLSNLTMLDLSANNLSGVIPENLTNISGLRYLNVSRNNLSGEIPAMLGSRFSNPSAFAMNQNLCGRPLNRKCKNKPNANSKKRKKLIFLIGVVVAGACLVSLCCCCYVFSLLRWRKRLREAGAGEKKPSPARASSGTDQGRGSGDNGGPKLVMFNNKITYAETVEATRQFDEEHVLNRGRYGLVFKACFQDGMVLSIRRLPDGSVEEGTFRKESESLGKVKHRNLTVLRGYYSGPPDVRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGVARGLAFLHTASMVHGDIKPQNVLFDADFEAHLSDFGLDRLTVATPAEASTSATPVGSLGYVSPEAALTGQATKESDVYSFGILLLELLTGRRPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGVKVGLLCTSPDPLDRPSMADIVFMLEGCRVGADIPSSADPTSQPSPA* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02071 1135 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 466 747 - -
Eupl03g02071 1135 SUPERFAMILY L domain-like 480 736 - -
Eupl03g02071 1135 Gene3D Ribonuclease Inhibitor 254 357 IPR032675 -
Eupl03g02071 1135 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Eupl03g02071 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Eupl03g02071 1135 Gene3D Transferase(Phosphotransferase) domain 1 917 1123 - -
Eupl03g02071 1135 FunFam Piriformospora indica-insensitive protein 2 357 452 - -
Eupl03g02071 1135 SMART serkin_6 841 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02071 1135 Gene3D Ribonuclease Inhibitor 187 253 IPR032675 -
Eupl03g02071 1135 FunFam Putative LRR receptor-like serine/threonine-protein kinase 804 916 - -
Eupl03g02071 1135 SUPERFAMILY Protein kinase-like (PK-like) 820 1120 IPR011009 -
Eupl03g02071 1135 Gene3D Ribonuclease Inhibitor 358 454 IPR032675 -
Eupl03g02071 1135 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Eupl03g02071 1135 PRINTS Leucine-rich repeat signature 166 179 - -
Eupl03g02071 1135 PRINTS Leucine-rich repeat signature 673 686 - -
Eupl03g02071 1135 Gene3D Phosphorylase Kinase; domain 1 819 916 - -
Eupl03g02071 1135 SMART LRR_sd22_2 259 286 - -
Eupl03g02071 1135 SMART LRR_sd22_2 93 116 - -
Eupl03g02071 1135 SMART LRR_sd22_2 433 452 - -
Eupl03g02071 1135 SMART LRR_sd22_2 625 648 - -
Eupl03g02071 1135 SMART LRR_sd22_2 163 186 - -
Eupl03g02071 1135 SMART LRR_sd22_2 673 699 - -
Eupl03g02071 1135 SMART LRR_sd22_2 211 237 - -
Eupl03g02071 1135 SMART LRR_sd22_2 313 339 - -
Eupl03g02071 1135 SUPERFAMILY L domain-like 286 571 - -
Eupl03g02071 1135 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 336 - -
Eupl03g02071 1135 Gene3D Ribonuclease Inhibitor 455 746 IPR032675 -
Eupl03g02071 1135 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Eupl03g02071 1135 Pfam Leucine rich repeat 315 374 IPR001611 GO:0005515
Eupl03g02071 1135 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Eupl03g02071 1135 Pfam Leucine rich repeat 410 470 IPR001611 GO:0005515
Eupl03g02071 1135 Pfam Leucine rich repeat 604 662 IPR001611 GO:0005515
Eupl03g02071 1135 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 186 - -
Eupl03g02071 1135 ProSiteProfiles Protein kinase domain profile. 841 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02071 1135 SUPERFAMILY L domain-like 28 306 - -
Eupl03g02071 1135 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 917 1121 - -
Eupl03g02071 1135 ProSiteProfiles Leucine-rich repeat profile. 261 283 IPR001611 GO:0005515
Eupl03g02071 1135 Pfam Protein kinase domain 843 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02071 1135 SMART LRR_typ_2 259 283 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 337 361 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 697 721 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 313 336 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 577 601 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 625 649 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 673 696 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 457 481 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 164 186 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 93 117 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 211 234 IPR003591 -
Eupl03g02071 1135 SMART LRR_typ_2 409 432 IPR003591 -
Eupl03g02071 1135 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 205 305 - -
Eupl03g02071 1135 MobiDBLite consensus disorder prediction 793 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02071 Eupl-Chr3 50084679 50089103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02071 4 1135 Receptor kinase-like Gene Family AT4G36180 66.140 0.0 1438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Eupl03g02071 Pkinase 1.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02071 - - nnu:104599991 1795.79