Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02039 ATGAAGATCCAGTGCGACGTCTGTAACAAAGATGAGGCCTCCGTCTTCTGCTCTGCCGACGAGGCTGCACTCTGCGATGGCTGCGACCGTCGTGTCCACCACGCCAATAAACTCGCCAGCAAACACCATCGCTTCTCTCTCCTCCACCCTTCCTGCAAAGACGCCCCTCGTTGCGACATCTGTCAGGAGAGGAGAGCCTTTTTGTTTTGTCGAGAGGACCGAGCGATTCTCTGCAGAGAATGCGACTTCCCTATTCACACGGCCAACGAACTCACCAAGAAGCACAATAGGTTTCTCCTCACCGGCGTCAAGCTCTCATCTACCTCTGCTGTCTTCCCATCCAACGGCTGTGATGCTGCTGCTGACTCTAAGAGGATGAACGATTCCCAGCCGTTCATGAAGAAGGACATGCCTATTATACCTGTGTCTGTATCTCATCAAGAGCCCATCCAGAATAATACTTCGACTCCATCAAAGGGTAGTGGTTGTGTTGATCATACGACGGGGAGCGATGGGGGTTCGACCAGTAGTATATCTGAGTACTTGATGGAGACTTTACCGGGCTGGCATGTCGAAGATTTTCTCGACTCTTCTTCTCCCACTCATGGTTTCTGTAAGAATGATGATCTGTTGCCGGTTTTGGATGCCAATCTTGAAACCAATCTGGGCTGTTTCGCTTCTGATAATTTGGCGATCTGGGTACCTCAAGCCCCACCTCCTCCTCATCCTCCTCCCCAAATCAACGGCTACAAGGACGGGTTGTTTAAGGAGTTGAAGGCAAGCAACCCAAATCCAAAGATCAGCCAGAGATGGAGAGACCATGGTTTTATGGTTCCTCAGATCAACCCTCCATCCATCAAGAGATCCAGGCCTACTTGGTAG 882 0.5079 MKIQCDVCNKDEASVFCSADEAALCDGCDRRVHHANKLASKHHRFSLLHPSCKDAPRCDICQERRAFLFCREDRAILCRECDFPIHTANELTKKHNRFLLTGVKLSSTSAVFPSNGCDAAADSKRMNDSQPFMKKDMPIIPVSVSHQEPIQNNTSTPSKGSGCVDHTTGSDGGSTSSISEYLMETLPGWHVEDFLDSSSPTHGFCKNDDLLPVLDANLETNLGCFASDNLAIWVPQAPPPPHPPPQINGYKDGLFKELKASNPNPKISQRWRDHGFMVPQINPPSIKRSRPTW* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02039 293 SMART bboxneu5 4 47 IPR000315 GO:0008270
Eupl03g02039 293 SMART bboxneu5 53 100 IPR000315 GO:0008270
Eupl03g02039 293 CDD Bbox1_BBX-like 5 47 - -
Eupl03g02039 293 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 284 - -
Eupl03g02039 293 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Eupl03g02039 293 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Eupl03g02039 293 CDD Bbox1_BBX-like 58 100 - -
Eupl03g02039 293 MobiDBLite consensus disorder prediction 148 175 - -
Eupl03g02039 293 FunFam B-box zinc finger protein 21 1 98 - -
Eupl03g02039 293 Gene3D Classic Zinc Finger 1 98 - -
Eupl03g02039 293 Pfam B-box zinc finger 55 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02039 Eupl-Chr3 49587638 49588797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02039 1 293 C2C2-CO-like Transcription Factor Family AT1G75540 47.305 1.99e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl03g02039 zf-B_box 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02039 - - zju:107420377 330.102