Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02032 ATGGCTGGGTTCTTTCTAGGTGGAGGAAACCAACAACACCCACCAAACGAAATCCCCCCCGAGAGCCTCTTTTCATACAGAAACGAAGAGATCTCATCCTACAACAAGGGTTTCGAGCTATGGCAACAACATCAGCAACATCTCCAACGGCAAGATGTCTACTCATCCACCGCCTTGGAGGTGGGTTCTAGTCGGAGCAGCAAAGTCTCAGATGAGTCGTCATCGAGAGTTGTAAGTATGATGATGAGGCAAGGAGGACGAGGAGGTGGGATGAGTTGCCAGGACTGTGGGAACCAAGCCAAGAAGGACTGCATCCATATGAGGTGCAGGTCTTGCTGTAAGAGCCGAGGCTTTCCGTGCCCAACCCACGTCAACAGCACTTGGGTCCCTGCTTCTAGAAGGCGAGAACGGCAGCAACAGCTCGCGGTTATTCAACAACAGCAGCAGCAACAACAACAACAACAGCAACGACAGCAGCTCCGAGGAGACCATTCCAAAAGGCAGAGAGAGAATCCCGGTACTTCCTCTCTCGTCTGCACTCGTTTACCCACAACCTCGTCAGGATTAGAAGTGGGCAATTTTCCCGCCGAAGTGAATTCTCCAGCGGATTTTCGTTGTGTTCGGGTCAGCGCCATGGACGACCCAGATGATCGGTACGCGTATCAGACGGCTGTGAGCATTGGAGGGCACGTCTTCAAAGGCATTCTCTATGATCAAGGCCCTGAGAGTCATCAATACGTTCCAGGCGAAAGCTCCTCTGGTGGGATAGGAGTTCCCCGTAATCTCATCACGGCTGCTGCTGCTACTACCACCACTACAGCCGCTGCCGCATTGCTTGATCCTTCTTCTCTATACCCAACTCCTCTCAACGCTTTCATGGCGGGTACGCAATTCTTCCCACACCCAAGATCTTAA 915 0.5235 MAGFFLGGGNQQHPPNEIPPESLFSYRNEEISSYNKGFELWQQHQQHLQRQDVYSSTALEVGSSRSSKVSDESSSRVVSMMMRQGGRGGGMSCQDCGNQAKKDCIHMRCRSCCKSRGFPCPTHVNSTWVPASRRRERQQQLAVIQQQQQQQQQQQQRQQLRGDHSKRQRENPGTSSLVCTRLPTTSSGLEVGNFPAEVNSPADFRCVRVSAMDDPDDRYAYQTAVSIGGHVFKGILYDQGPESHQYVPGESSSGGIGVPRNLITAAAATTTTTAAAALLDPSSLYPTPLNAFMAGTQFFPHPRS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02032 304 Coils Coil 134 163 - -
Eupl03g02032 304 MobiDBLite consensus disorder prediction 1 21 - -
Eupl03g02032 304 MobiDBLite consensus disorder prediction 124 159 - -
Eupl03g02032 304 Pfam Domain of unknown function (DUF702) 90 242 - -
Eupl03g02032 304 MobiDBLite consensus disorder prediction 124 182 - -
Eupl03g02032 304 NCBIfam LRP1 C-terminal domain 194 241 IPR006511 -
Eupl03g02032 304 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 290 IPR007818 GO:0003700|GO:0006355
Eupl03g02032 304 NCBIfam putative zinc finger domain, LRP1 type 92 134 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02032 Eupl-Chr3 49492679 49494646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02032 38 304 C2H2 Transcription Factor Family AT3G51060 52.885 8.59e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Eupl03g02032 DUF702 1e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02032 - - nnu:104607552 395.201