Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02018 ATGAGAGGCAAAGGAGGACCAGAGAATGCTCTATGCACTTACAGAGGCGTAAGGCAGAGAACCTGGGGTAAATGGGTGGCTGAAATCCGTGAACCCAATCGAGGCGCGCGTCTCTGGCTAGGGACGTTCGACACATCCGTGGAAGCGGCAATTGCGTATGATGATGTTGCTCGCAAGCTATACGGCTCGTCCGCAAAGCTCAATTTGCCTGAATTATGCGTCGAACCACCGTCGTCGATCCCTTCCGCTACTACCGAAATGGAAGAACTGACATCTTCTAAGCCAAGTACGAGCTTTCCTAATTTGGAAACTGAATTGCAGGGGAATGTTCAAGCAGAAGGTGACGTCAGTAACTCAATCAAGAGTGAAGATCATGATCAGATGGGAGAATTCTGGGGGAATCTGAGTTTCTTGCCAGAGGTAGTACATGATTCTATTTGGTTAGAGATGCCTATGGCAATGGAAAACTACTCTGAGATTTCGACTGGGGAGTTGATAAATGGAAGTTATGGAACAACTTGGTAA 525 0.4743 MRGKGGPENALCTYRGVRQRTWGKWVAEIREPNRGARLWLGTFDTSVEAAIAYDDVARKLYGSSAKLNLPELCVEPPSSIPSATTEMEELTSSKPSTSFPNLETELQGNVQAEGDVSNSIKSEDHDQMGEFWGNLSFLPEVVHDSIWLEMPMAMENYSEISTGELINGSYGTTW* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02018 174 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Eupl03g02018 174 SUPERFAMILY DNA-binding domain 13 70 IPR016177 GO:0003677
Eupl03g02018 174 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 111 - -
Eupl03g02018 174 FunFam Ethylene-responsive transcription factor 2 12 71 - -
Eupl03g02018 174 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Eupl03g02018 174 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Eupl03g02018 174 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Eupl03g02018 174 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Eupl03g02018 174 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Eupl03g02018 174 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02018 Eupl-Chr3 49205607 49206131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02018 1 154 AP2-EREBP Transcription Factor Family AT1G75490 48.387 7.21e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl03g02018 AP2 2.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02018 - - nnu:104587653 172.555