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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Eupl03g02012
ATGGCGAAAGCCCGACCACCAAGAAGAACCTTAGACACCTACACCATCAAAGGCACCAACAAAACTATCAAAGCTGGGGACTGCGTTTTGATGAGACCGGCGGACTCATCCAAACCCCCTTACGTAGCGAAAGTGGAGAAGATCGAATCGGACGCTAGAGGCCACGTGAAGGTACAGGTGCGGTGGTATTATCGGCCGGAGGAATCGATCGGAGGGCGGAGGCAGTTCCACGGGGCCAAAGAGGTGTTCCTGTCCGACCACTATGACGTACAGAGCGCAGATACCATCGAGGGCAAGTGTACCGTACACAGCTTTAAAAGCTACACCAAGCTCGATGCCGTTGGTAACGATGACTTTTTCTGTCGATTCGAGTATAATTCCGCAACCGGAGCGTTTAATCCCGACAGAGTTGCTGTATACTGCAAGTGTGAGATGCCTTACAACCCGGACGACTTAATGGTTCAGTGCGAGGGCTGCACTGATTGGTTTCATCCTCCTTGTATAGATATGAGCGTAGAGGAAGCCAAAAAAATAGAGCATTTCTTCTGTCAAAGTTGTGCCTCTCAAGATGAAAAGAAGTCGCGCAATCACACTGCTTCAAGAAACTCAGAGACAAAGGTATTTGTTAGGTATTCTGGCACTCGAAGGGTATAA
654
0.4924
MAKARPPRRTLDTYTIKGTNKTIKAGDCVLMRPADSSKPPYVAKVEKIESDARGHVKVQVRWYYRPEESIGGRRQFHGAKEVFLSDHYDVQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCTDWFHPPCIDMSVEEAKKIEHFFCQSCASQDEKKSRNHTASRNSETKVFVRYSGTRRV*
218
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Eupl03g02012
217
ProSitePatterns
Zinc finger PHD-type signature.
141
186
IPR019786
-
Eupl03g02012
217
FunFam
Chromatin remodeling protein EBS
1
132
-
-
Eupl03g02012
217
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
133
205
IPR013083
-
Eupl03g02012
217
ProSiteProfiles
Zinc finger PHD-type profile.
138
189
IPR019787
-
Eupl03g02012
217
Pfam
PHD-finger
140
188
IPR019787
-
Eupl03g02012
217
Gene3D
-
4
132
IPR043151
-
Eupl03g02012
217
SMART
PHD_3
140
187
IPR001965
-
Eupl03g02012
217
SMART
BAH_4
21
136
IPR001025
GO:0003682
Eupl03g02012
217
ProSiteProfiles
BAH domain profile.
21
136
IPR001025
GO:0003682
Eupl03g02012
217
Pfam
BAH domain
22
135
IPR001025
GO:0003682
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Eupl03g02012
Eupl-Chr3
49134937
49146534
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Eupl03g02012
41
138
Core DNA Replication Machinery Family
AT4G14700
29.293
3.19e-09
54.3
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
PHD
Eupl03g02012
BAH
2.6e-24
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Eupl03g02012
K25868
-
ming:122061584
397.127
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