Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01999 ATGTCCCAGTTCGAGCGAGGGCAGGGTCAGTGGCAGTGGGAAAACGCGACCGCAGGTGCCATTGCTGGATTTGCAACTGTGGCTTCTCTTCATCCCCTCGATGTCGTCCGTACAAGGTTTCAAGTTAACGATGGTAGAGTCTCCAACCTTCCACTATACAGGAACACGGGACACGCAATCTTAACGATTGCTAGAACGGAGGGTTTGAAAGGGCTTTATGCAGGTTTCTATCCAGCAGTCCTTGGTTCGACTATTTCTTGGGGTTTATATTTCTTCTTCTATGGCAGGGCAAAATATAGGTACTCCAAAGGCGGTGAAGAGAAGCTGAGCCCTGGTCTTCATCTTGTTTCAGCTGCAGAAGCAGGCGCTTTGGTGTGCTTATTCACAAATCCTGTTTGGCTTGTAAAAACGAGATTGCAGCTTCAGACGCCTCTTCATCAAACTCGGCCATATTCCAGTTTTTATGATGCTTTAAGAACAATACTGAAAGAGGAAGGATGGCGTGCACTTTATAAAGGGTTGGGCCCCAGCCTTCTGCTTGTTTCTCATGGTGCTATTCAGTTCACTGTGTACGAGGAGCTTCGTAAAATTGTTGTTGGATATAAGTGTAAAGAAGGAAAAATAAATCACTCAAATGGTGATGAATTGTTGAATTCAGTCGATTATGCTATGCTGGGGGCATCTTCTAAACTCGCTGCTATGCTTCTGACATATCCTTATCAGGCAGGCAATTTTTTCTGTATAAAAGTATGTCGTTGTTTGAGCATCCCTTTATGTTCATTGGCTGACTCCCTTTTGTTATTCCAGGTCATTCGAGCACGAGTACAGCAACGACCCAGTAATGATGGAATTCCAATATATAAGGATAGCTGGCATGTCTTGAAGGAAACTGTACGGTTTGAGGGTTTTCGTGGGTTTTATAAGGGTATCACAGCAAACCTACTGAAAAATCTCCCTGCTGCTTCAATAACATTTGTTGCATACGAAAACGCAATCAGGCTACTTAAACAAGCAAGAAGAAAAGACTGA 1029 0.4383 MSQFERGQGQWQWENATAGAIAGFATVASLHPLDVVRTRFQVNDGRVSNLPLYRNTGHAILTIARTEGLKGLYAGFYPAVLGSTISWGLYFFFYGRAKYRYSKGGEEKLSPGLHLVSAAEAGALVCLFTNPVWLVKTRLQLQTPLHQTRPYSSFYDALRTILKEEGWRALYKGLGPSLLLVSHGAIQFTVYEELRKIVVGYKCKEGKINHSNGDELLNSVDYAMLGASSKLAAMLLTYPYQAGNFFCIKVCRCLSIPLCSLADSLLLFQVIRARVQQRPSNDGIPIYKDSWHVLKETVRFEGFRGFYKGITANLLKNLPAASITFVAYENAIRLLKQARRKD* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01999 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 334 IPR018108 -
Eupl03g01999 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Eupl03g01999 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Eupl03g01999 342 SUPERFAMILY Mitochondrial carrier 13 241 IPR023395 -
Eupl03g01999 342 Gene3D Mitochondrial carrier domain 2 104 IPR023395 -
Eupl03g01999 342 Gene3D Mitochondrial carrier domain 105 342 IPR023395 -
Eupl03g01999 342 Pfam Mitochondrial carrier protein 12 102 IPR018108 -
Eupl03g01999 342 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Eupl03g01999 342 Pfam Mitochondrial carrier protein 268 337 IPR018108 -
Eupl03g01999 342 FunFam folate transporter 1, chloroplastic isoform X1 2 105 - -
Eupl03g01999 342 SUPERFAMILY Mitochondrial carrier 268 329 IPR023395 -
Eupl03g01999 342 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 268 340 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01999 Eupl-Chr3 48952656 48970797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01999 32 335 Chloroplast and Mitochondria Gene Families AT2G47490 35.390 7.89e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01999 K15115 - ming:122074557 494.582