Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01986 ATGGTGCGCTTCAATAGTGCCAGACTCGCCTACTGGTTCGCCCGAAGGTCTCTCGGTTCCAAGCTCCTCGACGATTCTTCCAATCTCTTTGATGAGTCGTTGGGTCGAGCGTTTCGTCGGGGATTCATTTCGGGAATCTGCAATTCGTCTCGGATTTTGGGACATGGGAATTCCGAAAATGTGAAACATAGGAATGGGGTGTGCAGTGGAGTTTTACATGGAAATTGGGTTCCAACGAGATCGATTCATGCAACTGGATCAATGTCTATGTCTGCAAGAGATTATTATGATGTACTCGGAGTAAGCAAGAATGCAAGTCCATCAGAAATCAAGAAAGCTTATTATGCGCTTGCAAAGAAGCTCCATCCAGATACAAATAAAGATGATGCTGATGCTGAGACAAAGTTCCAAGAGGTTCAAAAAGCATATGAGGTTTTAAAAGATGAGGAAAAGCGATCTCTTTATGACCAGGTTGGCCATGATACCTTTGAACAAGGTGCTGCTGGAGGTGGTGGCCCTGGTGGTCCATTTGGTGGCGGATTTGGTCCATTTGAGGACATCTTTGGTGGTGGTGGTGGTGGTGGAGTGAATGATTTCTTCAAAGACTTCTTCAGGCAAAGAGGATTTGGGGGCCAAGATGTCAAGGTTGCCCTTGAACTATCTTTCATGGAAGCTGTTCAGGGGTGCTCCAAAACTGTGACATTTCAAACTGCTTTACCTTGTGAAGCTTGTGGTGGCACAGGTGTTCCTCCTGGAACCAGGCCTGAAACATGTAGGCCTTGTAGAGGCTCAGGAATGATATTCATGCAGAAGGGCCCGTTTAGGTTGCAGTCAACGTGTACACATTGTGGTGGAACTGGGAAAACTGTAACGAGCTTCTGCAAATCATGCAAGGGAGATCGAGTTGTGAAAGGATCAAAGACTGTCAAGATAGATGTTATGCCTGGAGTTGATGATGATGAAACTATAAAGATCTATAAAAGTGGTGGAGCAGATCCCGATGGAAATCAACCTGGTGATCTTTATGTTACAATCAAGGTCCGAGAAGATCCTGTTTTCAGAAGAGAAGGTCCTGACATCCATGTTGATGCCATTTTGAGTGTCACTCAGGCAGTTCTGGGGGGTACCATCCAGGTTCCAACTCTGACTGGTGATGTTGTTCTTAAGGTCCGTCCAGGCACTCAACCTGGTCAGAAGGTTGTTCTGAAGAAAAAAGGGATTAAGACCAGGAGCTCTATTTCGTTTGGTGATCAATATGTGCACTTTAATGTCAGCATTCCGACGAATTTGACACAGAGACAGCGTAGTTTGATTGAAGAGTTTGCCAAGGAGGAGCAGGGAGAATATGACAAGGGTGATGCCGCAGTTGGAGCGTCTGGATCCACCGAGGGACTGGCGAAACATCAATACGGTCAGCGTCCACTAAGAGCTGTGATCGGCTTCGCTCACAACATGCAGTGA 1461 0.4634 MVRFNSARLAYWFARRSLGSKLLDDSSNLFDESLGRAFRRGFISGICNSSRILGHGNSENVKHRNGVCSGVLHGNWVPTRSIHATGSMSMSARDYYDVLGVSKNASPSEIKKAYYALAKKLHPDTNKDDADAETKFQEVQKAYEVLKDEEKRSLYDQVGHDTFEQGAAGGGGPGGPFGGGFGPFEDIFGGGGGGGVNDFFKDFFRQRGFGGQDVKVALELSFMEAVQGCSKTVTFQTALPCEACGGTGVPPGTRPETCRPCRGSGMIFMQKGPFRLQSTCTHCGGTGKTVTSFCKSCKGDRVVKGSKTVKIDVMPGVDDDETIKIYKSGGADPDGNQPGDLYVTIKVREDPVFRREGPDIHVDAILSVTQAVLGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKKKGIKTRSSISFGDQYVHFNVSIPTNLTQRQRSLIEEFAKEEQGEYDKGDAAVGASGSTEGLAKHQYGQRPLRAVIGFAHNMQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01986 486 Gene3D - 213 346 - -
Eupl03g01986 486 Hamap Chaperone protein DnaJ [dnaJ]. 91 454 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl03g01986 486 PRINTS DnaJ domain signature 96 114 IPR001623 -
Eupl03g01986 486 PRINTS DnaJ domain signature 114 129 IPR001623 -
Eupl03g01986 486 PRINTS DnaJ domain signature 131 151 IPR001623 -
Eupl03g01986 486 PRINTS DnaJ domain signature 151 170 IPR001623 -
Eupl03g01986 486 Pfam DnaJ C terminal domain 214 427 IPR002939 -
Eupl03g01986 486 CDD DnaJ 94 148 IPR001623 -
Eupl03g01986 486 NCBIfam molecular chaperone DnaJ 94 444 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl03g01986 486 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 228 304 IPR036410 -
Eupl03g01986 486 Gene3D - 348 454 - -
Eupl03g01986 486 Pfam DnaJ central domain 241 300 IPR001305 GO:0031072|GO:0051082
Eupl03g01986 486 SUPERFAMILY HSP40/DnaJ peptide-binding domain 352 438 IPR008971 GO:0006457|GO:0051082
Eupl03g01986 486 SUPERFAMILY HSP40/DnaJ peptide-binding domain 211 355 IPR008971 GO:0006457|GO:0051082
Eupl03g01986 486 Pfam DnaJ domain 94 156 IPR001623 -
Eupl03g01986 486 FunFam Chaperone protein dnaJ 1, mitochondrial 348 454 - -
Eupl03g01986 486 CDD DnaJ_C 212 430 - -
Eupl03g01986 486 SUPERFAMILY Chaperone J-domain 89 196 IPR036869 -
Eupl03g01986 486 ProSiteProfiles dnaJ domain profile. 94 159 IPR001623 -
Eupl03g01986 486 CDD DnaJ_zf 241 301 IPR001305 GO:0031072|GO:0051082
Eupl03g01986 486 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 64 450 - -
Eupl03g01986 486 ProSitePatterns Nt-dnaJ domain signature. 136 155 IPR018253 -
Eupl03g01986 486 Gene3D - 233 305 - -
Eupl03g01986 486 FunFam Molecular chaperone DnaJ 233 306 - -
Eupl03g01986 486 Gene3D DnaJ domain 91 212 IPR036869 -
Eupl03g01986 486 SMART dnaj_3 93 151 IPR001623 -
Eupl03g01986 486 ProSiteProfiles Zinc finger CR-type profile. 228 306 IPR001305 GO:0031072|GO:0051082
Eupl03g01986 486 FunFam Chaperone protein dnaJ GFA2, mitochondrial 91 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01986 Eupl-Chr3 48789680 48813868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01986 93 156 C2H2 Transcription Factor Family AT1G74250 44.928 2.24e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01986 K03686 - msin:131237511 699.893