Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01969 ATGGCTTCCTCTAGTGGGACTTCTTCAGGGTCTACTATGCTTCAGAACTCTGGTTCTGAAGAAGACCTCCAGCATGTAATGGATCAAAGGAAACGGAAGAGGATGTTATCGAACCGTGAATCGGCAAGACGATCAAGAATGCGGAAACAGAAGCACTTGGATGATCTGATGGCTCAAGTGGGTCAACTCAGGAAGGAAAACAACCAGATTCTTACAAACTTAAACATCACCAACCAGCACTTCCTGAATATGGAGTCTGAGAATTCAGTCTTGAGGGCTCAGATGGGTGAGTTAACTCACAGACTACAGTCTCTCAATGAGATCATTCAATTCTTAAATGCAAGCAATATTGGTGGTTTTGAGACAGAGAATCCTCAGGCCAGTGCTGCTGATACCTTCGTGAATCCATGGAATTTGCTCTATATGAATCAACCCATCATGGCTTCTGCTGACATTTTTCAGTACTGA 468 0.4359 MASSSGTSSGSTMLQNSGSEEDLQHVMDQRKRKRMLSNRESARRSRMRKQKHLDDLMAQVGQLRKENNQILTNLNITNQHFLNMESENSVLRAQMGELTHRLQSLNEIIQFLNASNIGGFETENPQASAADTFVNPWNLLYMNQPIMASADIFQY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01969 155 MobiDBLite consensus disorder prediction 1 22 - -
Eupl03g01969 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Eupl03g01969 155 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Eupl03g01969 155 MobiDBLite consensus disorder prediction 1 51 - -
Eupl03g01969 155 Coils Coil 46 73 - -
Eupl03g01969 155 Gene3D - 28 83 - -
Eupl03g01969 155 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Eupl03g01969 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Eupl03g01969 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 152 - -
Eupl03g01969 155 FunFam BZIP transcription factor 28 79 - -
Eupl03g01969 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Eupl03g01969 155 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Eupl03g01969 155 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01969 Eupl-Chr3 48559836 48561682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01969 24 155 bZIP Transcription Factor Family AT4G34590 58.993 2.20e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl03g01969 bZIP_1 8.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01969 K25786 - nnu:104595624 226.868