Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01968 ATGTTGAGATCTTCAGAACTTCCAGATTGTTTCTATAAAAACCAGCCCATCTTAATCTCTCCAAAGAGCCCAACCCCAAAACATTCTCTTTATCTCTCAAACCTTGATGACCAAAAATTTCTGAGATTCTCGATTAAATACGTTTATGTCTACAAGAAATCTGTATGTTTAGAGAGCTTGAAATCTTCACTTTCAAGGGTTCTTGTTGACTACTACCCATTAGCGGGAAGGTTGAGAATTAGTACAGAAAATGAAGAGAAGCTTGAGGTTGATTGCAATGGAGAAGGTGCTGTGTTTGCAGAAGCTTTCATGGATTTTACTGTGGAGGAGTTTCTAGAAGCTTCTAAAAGGCCTAACTTGTCTTGGAGGAAGCTCTTGTATAGGGTGGACGCTCAGAGCTTCTTGGGTATCCCTCCTCTTGTAATTCAGGTCACGAACCTCAGCTGCGGAGGAATGATACTGTGTACCGCGTTCAATCATTGCCTATGCGACGGTGTTGGTACATCCCAATTTCTACATGCTTGGGCCCTACTTACAACTAAACCCAGCGCGGATCTCCCGTTTACCCCCGTCCACAGCCGCCACGTTTTAAGACCTCGATACCCTCCGAAAGTAACCTTCGCTCATCCTGAATTTACCAACAATGCCCCTCATGATCATACGCACTTCGACCTCCCACAAATTCTCCAATCCGAACCCCTTGTCCCCATCACATTAACCTTCACTCCCTCTCATATCCTTCACCTCAAGAGGCTTTGTGTCCCTTCGCTAAAATGCACCTCCTTTGAAGCACTTGCCTCTCACATGTGGCGTTGTTGGATTAAATCACTGAACCCGCCTTCATCACTCAAGATCAAGCTCCTTTTCTCGGCTAACGTAAGGAAAGCAATAAAACCAGAATTACCACAAGGGTATTATGGCAATGGATTCGTGCTAGGATGCGCTGAGACGACAGTTAAAGAGTTAGTTAATGCTAATGGGCACCATAGGGTGAAGTTGGTCCAAGATGCGAAGAGAACACTAACTAACGATTATGTAAGGTCAATGATTGATTTTTTGGAGGAACGGAGAGTAAAACCTGATCTTTCTGCGACTTTGGTTATCTCCCAATGGTCTAAATTAGGGTTAGAAAATTTGGATTTCGGAGAGGGGAAACCTCTGCACATTGGTCCTCTTGCTAGTGAAATTTACTGCTTGTTCTTACCAGTTGTCGGTGATTTAGATGCCGTAAAAGTCCTTGTATCGGTGCCGGAGAGCGTGTTAGACAAGTTCGAGTACTACATGAATGATTTATCTGATAGAGAAGTGAATACTGAAGTTGAAGAACATGAAGAAGGTGAATGA 1344 0.4353 MLRSSELPDCFYKNQPILISPKSPTPKHSLYLSNLDDQKFLRFSIKYVYVYKKSVCLESLKSSLSRVLVDYYPLAGRLRISTENEEKLEVDCNGEGAVFAEAFMDFTVEEFLEASKRPNLSWRKLLYRVDAQSFLGIPPLVIQVTNLSCGGMILCTAFNHCLCDGVGTSQFLHAWALLTTKPSADLPFTPVHSRHVLRPRYPPKVTFAHPEFTNNAPHDHTHFDLPQILQSEPLVPITLTFTPSHILHLKRLCVPSLKCTSFEALASHMWRCWIKSLNPPSSLKIKLLFSANVRKAIKPELPQGYYGNGFVLGCAETTVKELVNANGHHRVKLVQDAKRTLTNDYVRSMIDFLEERRVKPDLSATLVISQWSKLGLENLDFGEGKPLHIGPLASEIYCLFLPVVGDLDAVKVLVSVPESVLDKFEYYMNDLSDREVNTEVEEHEEGE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01968 447 Gene3D - 227 430 IPR023213 -
Eupl03g01968 447 Gene3D - 13 214 IPR023213 -
Eupl03g01968 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 419 - -
Eupl03g01968 447 Pfam Transferase family 18 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01968 Eupl-Chr3 48530711 48533992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01968 18 428 Monolignol Biosynthesis Gene Families AT5G48930 28.176 1.58e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01968 - - nnu:104595626 724.546