Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01949 ATGTCAGCAACGCCCATTTCATACACAGCCACCTTCAGATTATCTCCTTGTCTTAAATCTCTAAAACCCAACTCATTTAATGAATTTCCCGCCACAAAACCAAATTTGCTTTGTGGGTCTATCTCAAGAATACTTGTTTATGAGAAAACAAGGGTTTGGGGGCCAAAAACGAGGACTGAATTGATCAGAACTTCTGCTTTCAGAAGTAGCGACGGCGATGAAGAATTCGGGGTTATTGAAAAAGAAGCTATTTTGAGTAATGGGCCGTCGGAGTTACGTCAAGATTTAATGTCTGATGAACTGGAATCGACTCTCAATCGATGGAGCAAGTGGCTAGTCGCTGCACTTTTTGGTGTTGTCATTATTTGGAAGCATGATCCCCCGTCCATGTGGGCTGGGATGGGAACGGTTTTAAATACCTGGCTTTCAGTTACTCTGAAGCACATACTCAATCAAGAGCGACCTGTTTCTAACTTGAGATCCGACCCAGGGATGCCATCTTCACATGCACAGTCCATCTTCTTTGCTGTCATCTTTGTTATTATATCATTGGTCAAAAGGCTCGGGATCAACAAAGTTACAGTGACTTTCGGGGTGCTTGCCTTGGCTTTTGGCTCATATCTTTCATGGCTACGGGTATCGCAACAATTTCACACCATCAGCCAAGTTATCGTGGGTGCTGTACTAGGATCCATATGTTCGATCTTGTGGTTTCAGTCATGGGACACAATTGTGCTGACTGCCTTCATTTCCTCTTTGTGGGTCCGAATTGTTGTTGTTCTTGGAGGTGCCGGGTTTTGTCTGGGCGTTACGCTGTCTGCGCCGAAGAAGGATAAGCTCTTCCTCCATTTTCCAAGCCCGCTAAATCTGGCGGTGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAATATGGTGCTTTTTTATCAGGCCACCTACGACAAGCTCCTCTCCAAGGCCCACAAATACAAGCTCATCACCCCTTCCATTCTCTCTGACAGATTGAGGATTCTTAGCAATTCTATTCCTCGTTCAAATATTGCATTACTTCGAGGATCTGGTGTTATTAAGCTCTCGATTATTGATGCGTTGGGTTTCTTTGATCATGGCTTTCCCACTAGAAAAGAATGCAAGTTTGGCAGGATACCCTCCGAATTGATCTTTTCCAGGACAGGATATGAGCTTGTTGGGTCGTCTTTGTGCAGACTGCAGAGGGCTTCACAGATTGAAGAAATGGGAACCGAATTGAATGTGATCCCCTGTTACTTGTCACAGTGA 1281 0.4481 MSATPISYTATFRLSPCLKSLKPNSFNEFPATKPNLLCGSISRILVYEKTRVWGPKTRTELIRTSAFRSSDGDEEFGVIEKEAILSNGPSELRQDLMSDELESTLNRWSKWLVAALFGVVIIWKHDPPSMWAGMGTVLNTWLSVTLKHILNQERPVSNLRSDPGMPSSHAQSIFFAVIFVIISLVKRLGINKVTVTFGVLALAFGSYLSWLRVSQQFHTISQVIVGAVLGSICSILWFQSWDTIVLTAFISSLWVRIVVVLGGAGFCLGVTLSAPKKDKLFLHFPSPLNLAVKWSKGKQKEKVNNMVLFYQATYDKLLSKAHKYKLITPSILSDRLRILSNSIPRSNIALLRGSGVIKLSIIDALGFFDHGFPTRKECKFGRIPSELIFSRTGYELVGSSLCRLQRASQIEEMGTELNVIPCYLSQ* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01949 426 Gene3D - 291 362 - -
Eupl03g01949 426 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 109 242 IPR036938 -
Eupl03g01949 426 SMART acid_phosph_2 129 238 IPR000326 -
Eupl03g01949 426 PANTHER PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 99 261 - -
Eupl03g01949 426 Pfam PAP2 superfamily 154 240 IPR000326 -
Eupl03g01949 426 Pfam S25 ribosomal protein 293 359 IPR004977 -
Eupl03g01949 426 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 158 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01949 Eupl-Chr3 48184893 48197416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01949 274 359 Cytoplasmic Ribosomal Protein Gene Family AT4G39200 57.895 4.95e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01949 - - vvi:100265095 292.352