Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01910 ATGGGGATTCATGGTTACGTTCTTGCATTAGTTTTGTTTTCTTTCATGGTTACCTCTCGTGCAGGCCCATCCGATATGTCTACCGCGCTTCTCATAAGAGTCGATCAGTCGGGAAATGGAGATTATAAGAAGATACAAGATGCCATTGACTCCGTGCCGTCTAACAACTCTGAGCTAGTCTTCATATGGGTTAAGCCAGGAATCTACAGAGAAAAGATTGTTGTGCCTGCGGATAAGCCCTTCATAACACTGAGTGGCTCAAAGGCGACGACTACCATAATAACATGGAGCGATGGAGGGGAGATATTTGATTCTCCAACATTCTCTGTATTGGCTTCTGACTTTGTAGGAAGATTCCTCACAATTCAGAATAAGTTTGGGCCGGGGAGCAAAGCAGTTGCGTTAAGGGTATCGGGGGATAGAGCGGCATTCTACGGGTGCAGAATCCTATCATATCAGGATACCCTCCTTGATGATGCCGGAAGGCACTATTACAGCAACTGTTACATTGAAGGAGGAACCGATTTCATATGTGGAAATGCAGCTTCTCTCTTCGAAAAGTGTCATCTGCATTCACTTGCGGATGGAACCGGCCCTATCACGGCGCAACGCAGGGAGTCACCGGCAGAGAACACGGGCTACACCTTCTTGGGTTGCAGGATCACGGGCGTAGGGAATGCCCTCTTAGGAAGGCCATGGGGTGCTTATTCTAGGGTGGTGTTTGCCCTAACTTACATGTCCAATGTTATATTGCCTCAGGGATGGGACGACTGGGGTGATCCCACCAAGCAAAGTACGGTGTATTATGGGCAATACAAGTGTTACGGACCAGGGTCCCGTGTCTCGGGAAGGGTTGGATGGTCACGCATTCTCTCAGATGATGAAGCTGCACCCTTCTTGACTAAGAACATGATCGGTGGTCGAGGTTGGCTTAGGCCCGCACCAACCATGAAGAATGTTAGTAGGTTGTGCCATGCCAAACCTATTGTTACTGTAAATGGGATGTTCCCTGGACCTACACTTTATGTTAGAGAAGGAGATCAAGTATTCGTCAATGTTACCAATTATGCGCAATATAACATGTCGATTCATTGGCATGGATTGAAGCAATTCCGTAATGGTTGGGCAGATGGACCAGCTTACATAACACAGTGTCCGATCAAGACTGGGAACAGTTACAGTTACCAATTCAATGTAACGGGTCAACGAGGAACCTTGTGGTGGCACGCACATATCTTTTGGCTAAGGGCAACAGTCTATGGTGCAATTGTCATCATGCCCAATCAAGGAACCCCATTTCCTTTCCCACAGCCTCACAGTGAAGTTAATTTAATCTTAGGAGAATGGTGGCACACCGATGTCGAAGATGACGTCCAACAGGGGAGCAAGTTGGGGTTGCCACCGAAAATGTCCGACGCACATACGATCAATGGAAAGCCAGGGCCACTCTTCCCATGTTCAGAGAAACATACCTTTGCAATGGAGGTTGAACAGGGAAAGACGTATCTCTTGAGAATCATCAACGCTGCCCTCAACGATGAGCTTTTCTTTGCCATTGCTGGTCACAATATGACAGTGGTGGAGATTGATGCAGTGTACACCAAGCCCTTCACCACTCAATCTTTACTAATTGCACCTGGCCAAACAACAAACGTTCTTGTTCAAGCCAACCAAACACCAGGCAGATATTTCATGGCTACCAGGCCTTTCTTGGACATTCCTATTCCCATAGACAACAAAACCGCCACGGCCATTTTACAATACAAAGGCATCCCAAACACTGTCCTCCCTATCCTGCCTATACTGCCTACACCCAACGACACAAATTTCGCATTGAGCTACAACAAGAAGCTCAAGAGTCTGAATTCTCCACAATTCCCTGCAAATGTTCCCCTCGATGTCGATCGACATCTTTTCTACACAATTGGTTTAGGGAGAAATCCATGCCCCACTTGCCAGAATGGAACACAACTCACAGCTTCCTTGAACAACATCAGTTTCACGATGCCGCAAATTGGTCTTCTTCAAGCTCACTATTTCAATACCAATGGGGTTTTTAAAACTGATTTCCCTGACCGTCCTCCGACTCCTTTTAACTACACTGGTGCACCACTTACAGCCAACCTTGGCACCTCCTTAGGCACTAGGCTTAGTAAAATTGCCTTCAATTCGACTGTTGAATTGGTACTACAAGATACCAATCTTCTCACTGTTGAGTCCCATCCATTCCATCTTCATGGTTACAACTTCTTTGTCGTTGGAACAGGAATCGGAAACTTCGATCCTGCAAAAGATCCAGCTAAATTTAACTTGGTCGATCCTCCGGAGAGAAATACAGTCGGAGTTCCCACCGGCGGTTGGACTGCGATTAGGTTTAAGGCTGATAATCCAGGTGTATGGTTCATGCATTGTCATTTGGAACTCCATACTAGCTGGGGATTGAAGACTGCGTTCGTCGTAGAGGATGGAAAAGGGCCAAATCAATCTATTTTACCGCCACCGAAGATCTTCCCCCTTGCTAGATGCTCTAACAAGTGTGAAGAACTCAACGTGGTATGTGTTTGTGCGAGCATTTCTTGTTGGAGCTATGGTCTTTTAATTGTATATTTATCTCCTGAAAAAGTTGCGGGAGGTTCGTGGAGAATGAAATTTGTGAAGATGGAAAGTCTGTTTGAGATTGTTTTGAGGTCCAATTGA 2697 0.4613 MGIHGYVLALVLFSFMVTSRAGPSDMSTALLIRVDQSGNGDYKKIQDAIDSVPSNNSELVFIWVKPGIYREKIVVPADKPFITLSGSKATTTIITWSDGGEIFDSPTFSVLASDFVGRFLTIQNKFGPGSKAVALRVSGDRAAFYGCRILSYQDTLLDDAGRHYYSNCYIEGGTDFICGNAASLFEKCHLHSLADGTGPITAQRRESPAENTGYTFLGCRITGVGNALLGRPWGAYSRVVFALTYMSNVILPQGWDDWGDPTKQSTVYYGQYKCYGPGSRVSGRVGWSRILSDDEAAPFLTKNMIGGRGWLRPAPTMKNVSRLCHAKPIVTVNGMFPGPTLYVREGDQVFVNVTNYAQYNMSIHWHGLKQFRNGWADGPAYITQCPIKTGNSYSYQFNVTGQRGTLWWHAHIFWLRATVYGAIVIMPNQGTPFPFPQPHSEVNLILGEWWHTDVEDDVQQGSKLGLPPKMSDAHTINGKPGPLFPCSEKHTFAMEVEQGKTYLLRIINAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQSLLIAPGQTTNVLVQANQTPGRYFMATRPFLDIPIPIDNKTATAILQYKGIPNTVLPILPILPTPNDTNFALSYNKKLKSLNSPQFPANVPLDVDRHLFYTIGLGRNPCPTCQNGTQLTASLNNISFTMPQIGLLQAHYFNTNGVFKTDFPDRPPTPFNYTGAPLTANLGTSLGTRLSKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPAKDPAKFNLVDPPERNTVGVPTGGWTAIRFKADNPGVWFMHCHLELHTSWGLKTAFVVEDGKGPNQSILPPPKIFPLARCSNKCEELNVVCVCASISCWSYGLLIVYLSPEKVAGGSWRMKFVKMESLFEIVLRSN* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01910 898 SUPERFAMILY Cupredoxins 316 453 IPR008972 -
Eupl03g01910 898 SUPERFAMILY Cupredoxins 435 619 IPR008972 -
Eupl03g01910 898 PANTHER MULTI-COPPER OXIDASE 321 831 IPR045087 -
Eupl03g01910 898 Gene3D - 317 429 IPR008972 -
Eupl03g01910 898 CDD CuRO_2_LCC_plant 442 588 IPR034285 -
Eupl03g01910 898 SUPERFAMILY Pectin lyase-like 28 315 IPR011050 -
Eupl03g01910 898 ProSitePatterns Multicopper oxidases signature 2. 803 814 IPR002355 GO:0005507
Eupl03g01910 898 Pfam Multicopper oxidase 690 823 IPR011706 GO:0005507|GO:0016491
Eupl03g01910 898 Gene3D - 650 850 IPR008972 -
Eupl03g01910 898 FunFam Laccase 439 624 - -
Eupl03g01910 898 FunFam Pectinesterase 26 315 - -
Eupl03g01910 898 ProSitePatterns Multicopper oxidases signature 1. 798 818 IPR033138 -
Eupl03g01910 898 CDD CuRO_3_LCC_plant 685 823 IPR034289 GO:0005507
Eupl03g01910 898 SUPERFAMILY Cupredoxins 631 838 IPR008972 -
Eupl03g01910 898 FunFam Laccase 314 427 - -
Eupl03g01910 898 CDD CuRO_1_LCC_plant 317 427 IPR034288 GO:0005507
Eupl03g01910 898 Pfam Multicopper oxidase 442 590 IPR001117 -
Eupl03g01910 898 Pfam Multicopper oxidase 317 428 IPR011707 GO:0005507
Eupl03g01910 898 Gene3D - 439 623 IPR008972 -
Eupl03g01910 898 Pfam Pectinesterase 34 307 IPR000070 GO:0030599|GO:0042545
Eupl03g01910 898 NCBIfam laccase 317 838 IPR017761 GO:0046274|GO:0048046|GO:0052716
Eupl03g01910 898 Gene3D - 28 316 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01910 Eupl-Chr3 47656193 47666979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01910 31 313 Carbohydrate Esterase AT5G47500 42.193 5.27e-80 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01910 K05909 - jre:109013800 975.311