Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01886 ATGGCTTCCTCACGCAGCTCCCGCACCACTTGGACTACCGAGCAAAACAAATTGTTCGAAGATGCCCTAGCCATGTATGACAAGGACACCCCTGACCGATGGCACAATATTGCCAGGGCCGTGGGTGGAAAAACTGTGGAGGATGTGAAGAGGCAATATCAAATCCTCGAAGAGGATGTCAGGCGCATTGAGTCCGGCAAAGTGCCATTCCCCAAGTACAAGACAAATGGAGGAAGCAGAGAATCAAGAACTTCGATCTCGAATCCTTCGCAAGAACGACGAGATCTGAAACCGGTGAACTCGTTGAAAGCTAGCTTCATCAAAAGAAATCGCTCTGGGAGTTCCCGAGAGAAAGAGAGAGAGATCGAAGAAACCAGAAATGGCGAAATGAGGGTAAAAGGCGCGGTGAGGACTCAGGAGGGGAAGAGTGAACTGAAGAGAGCTGAAGAGGCGGGAATTTTTCTCTTTGAAAATAAAACAAGGACCTTTATTTTCATGACCACGATTTCCGCGGGAAGACTCTGA 525 0.4857 MASSRSSRTTWTTEQNKLFEDALAMYDKDTPDRWHNIARAVGGKTVEDVKRQYQILEEDVRRIESGKVPFPKYKTNGGSRESRTSISNPSQERRDLKPVNSLKASFIKRNRSGSSREKEREIEETRNGEMRVKGAVRTQEGKSELKRAEEAGIFLFENKTRTFIFMTTISAGRL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01886 174 SMART sant 7 59 IPR001005 -
Eupl03g01886 174 CDD SANT 10 54 IPR001005 -
Eupl03g01886 174 ProSiteProfiles Myb-like domain profile. 3 57 IPR001005 -
Eupl03g01886 174 MobiDBLite consensus disorder prediction 77 95 - -
Eupl03g01886 174 FunFam Transcription factor SRM1 3 70 - -
Eupl03g01886 174 ProSiteProfiles SANT domain profile. 6 61 IPR017884 -
Eupl03g01886 174 MobiDBLite consensus disorder prediction 66 143 - -
Eupl03g01886 174 Gene3D - 1 70 - -
Eupl03g01886 174 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Eupl03g01886 174 MobiDBLite consensus disorder prediction 110 143 - -
Eupl03g01886 174 SUPERFAMILY Homeodomain-like 9 65 IPR009057 -
Eupl03g01886 174 Coils Coil 46 66 - -
Eupl03g01886 174 Pfam Myb-like DNA-binding domain 8 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01886 Eupl-Chr3 47350748 47352429 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl03g01886 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01886 - - ming:122083308 131.339