Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01884 ATGGCGGATCGACGAACTATTGTAGAATTTGTTCTTCTATTTATACTCTTTCAGTCTGCATTTGGGCAGTTGAGTTCCGGTGCTGAGCGGGCTGCCTTACTTGACCTACGGTCGTCTTTAGGATTAAGGGGAAAAGACTGGCCAATAAAGGCTGACCCTTGCTTGGTTTGGGTTGGGGTCAAATGTAGACAAGACGGTCGTGTCGTCGAGCTTAACATATCGGGGTTCAGGCGTACCCGCGTGGGTCGTCAAAATCCCCAGTTCTCAGTGGACGCCCTTGCCAATTTCACTTTCTTGAACTCCTTTATTGCCTCTGGATTCTTGCTTCCTGGTCCCATTCCTGACTGGTTTGGGCTACGTCTTCCGTCGCTCCAAGTGCTCGATCTTCGGTCTTGTTCCATCGTTGGTCCTATCCCTTCTTCACTCGGAAATTTAACCAATCTCAATTCGCTTATTCTCTCTGTCAATGATCTTACTGGCATAATTCCTTCAACTCTAGGTCAGTTATCGCGTCTCTCAGCTCTTGATCTATCACAGAATTTATTCACTGGATCCATCCCTTCGTCTTTGTCCTCTCTCACCAATCTTACCCGTCTCGACCTCTCTTCGAATTTCCTATCTGGGCAGATTCCTCCCGCCTTTGGGAACCTCTACAAGCTTCAATTCTTGAATCTTTCCAGCAACAGTCTCTCTGCTTCTATTCCTGTCCAGCTAGGCAACCTTTCTCGCCTGGTTGACCTTGATCTCGGGTTAAATTCTTTGTCCGGGTCGTTGCCCTCAGATTTGAGACGGTTGAGTAATTTGCAGACAATGGTGGTTGGGAGCAATGCTCTAGATGGTTCATTGCCTGACAATTATTTTTCCACTCTCACTCGGCTGCAGTTTTTAGTTCTGAGTCACAACCTTTTATCTGGTGTTCTTCCTCAGTCATTGTGGTCGATGCCTGAATTACTCTTTCTCGACGTCTCCTACAATAACTTCACGGGTATTCTTTCTAACCTTAGTTCGAATGCTAATGCCACTGCTCAAGTGTTCGACCTCTCACACAATCAATTTTATGGAAATCTGACTTCCCAACTCCAGAGGTTCAGTTTTATCAATATGTCGGATAATTATTTCCAAGGCAGGGTTCCTGATACTCACATGAATGCTTCTCTCACAAGTAATTGCCTTCAGAATGTGTTGAATCAGAGGAGTTTGGAGGACTGTACATTGTTCTATGCTGAGAGAGGCCTGAGTTTTGATAATTTTGGAGTACCAAACACAACCCAACCAACTGCGCCCGGAGGCCCTGGACCAGTTAGGAAGAGCAACAGACGGTTGACATTCATATTGTCAGGAGTGTTTGGGGGGCTTGGTTTTATTGTACTTTTGGTGTTGTTGCTGGTATTGTGCCTACGCACACGTGATAGGGGTGTTTCTGATCAAAGGGGGAGAGGTGTGGGCCCTATCCCTGCAGGAGGTAGTCCACCACCACCTTCTGGGGTATCAATTAATTTCTCGAGTCTGGGAGAAGCATTTACATATGAGCAGCTACACCGGGCAACTGGTGATTTTAGTGATTCAAACCTGATCAAACACGGGCACTCAGGGGACTTCTTCCGAGGTGTCTTGGAAAGTGGGATTCCTGTGGTCATCAAGAGGATCGATGTGCATGCAGTCAAGAAGGAATCATACATGGTGGAGTTGGACTTGTTCAGTAGGGCTTCACATACCAGATTGGTCCCACTCTTGGGGCACTGTTTGGAGCATGAGAATGAGAAGCTCCTGGTTTACAAATATATGCCGAATGGGGACTTGTCTAATTCGTTGTACAGGAAATCCAATCCGGAAGATGACAGTTTACAGTCTCTGGATTGGATAACGAGACTGAAAATTGCAATTGGAGCTGCAGAGGGTCTATCTTATCTACATCATGAATGCAGTCCACCCCTTGTTCACAGAGATGTTCAAGCAAGCAGTATCCTTCTTGATGATAAATTCGAAGTGCGGCTTGGAAGCTTGAGCGACGTATGCACTCAAGAAGGTGATACTCACCAAAATGTGATCACCAGGTTGCTGCGGCTGCCACAGTCCATGGAACAAGGCCCTTCCGGCTCTCCATCATCAACTTGCGCTTACGATGTTTACTGCTTTGGGAAAGTGTTGCTTGAGCTGGTAACGGGTAAGATGGGCATTAGTGCATCCAATGATTCCACCATGAACAAATGGCTGGAACACACGCTACCTTATATCAGTATGTACGACATGGAACTTATGACAAAGATCGTAGACCCATCTCTCCTTGTATATGAGGACCTGATGGAGGAGGTCTGGGCAATGGCGATCGTGGCCAGATCATGCCTTAACCCAAAGCCTTCTAAACGCCCGCTGATGAGATACATCCTTAAAGCTTTGGAGAACCCTTTGAAAGTGGTGAGGGAAGAAAACTCCGGCTCGGCAAGGCTGCAAACAGTTTCATCAAGGGGATCTTGGAATGCAGCTCTCTTTGGTAGTTGGCGTCACAGCTCATCAGACATTGTGGCTTCTTCTGGTCCAACCAACAGAGAAGGGGGCAGTAGCTTAAAACGGTCCGGTACAGCCGGTTCTCAAGGAAGTGGGCAATGCGGTGGGGGTGGTGACCTCTCGTCTTCCAACAAGAGGCTATCCAGGGAAATCTTCCCGGAACCAGCTGACGTACCAGACATAGAGAGACCAGGGGAAGCCTAG 2709 0.474 MADRRTIVEFVLLFILFQSAFGQLSSGAERAALLDLRSSLGLRGKDWPIKADPCLVWVGVKCRQDGRVVELNISGFRRTRVGRQNPQFSVDALANFTFLNSFIASGFLLPGPIPDWFGLRLPSLQVLDLRSCSIVGPIPSSLGNLTNLNSLILSVNDLTGIIPSTLGQLSRLSALDLSQNLFTGSIPSSLSSLTNLTRLDLSSNFLSGQIPPAFGNLYKLQFLNLSSNSLSASIPVQLGNLSRLVDLDLGLNSLSGSLPSDLRRLSNLQTMVVGSNALDGSLPDNYFSTLTRLQFLVLSHNLLSGVLPQSLWSMPELLFLDVSYNNFTGILSNLSSNANATAQVFDLSHNQFYGNLTSQLQRFSFINMSDNYFQGRVPDTHMNASLTSNCLQNVLNQRSLEDCTLFYAERGLSFDNFGVPNTTQPTAPGGPGPVRKSNRRLTFILSGVFGGLGFIVLLVLLLVLCLRTRDRGVSDQRGRGVGPIPAGGSPPPPSGVSINFSSLGEAFTYEQLHRATGDFSDSNLIKHGHSGDFFRGVLESGIPVVIKRIDVHAVKKESYMVELDLFSRASHTRLVPLLGHCLEHENEKLLVYKYMPNGDLSNSLYRKSNPEDDSLQSLDWITRLKIAIGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSDVCTQEGDTHQNVITRLLRLPQSMEQGPSGSPSSTCAYDVYCFGKVLLELVTGKMGISASNDSTMNKWLEHTLPYISMYDMELMTKIVDPSLLVYEDLMEEVWAMAIVARSCLNPKPSKRPLMRYILKALENPLKVVREENSGSARLQTVSSRGSWNAALFGSWRHSSSDIVASSGPTNREGGSSLKRSGTAGSQGSGQCGGGGDLSSSNKRLSREIFPEPADVPDIERPGEA* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01884 902 SMART LRR_typ_2 145 168 IPR003591 -
Eupl03g01884 902 SMART LRR_typ_2 193 216 IPR003591 -
Eupl03g01884 902 SMART LRR_typ_2 169 192 IPR003591 -
Eupl03g01884 902 SMART LRR_typ_2 217 241 IPR003591 -
Eupl03g01884 902 SMART LRR_typ_2 265 289 IPR003591 -
Eupl03g01884 902 SMART LRR_typ_2 314 337 IPR003591 -
Eupl03g01884 902 SMART LRR_typ_2 290 313 IPR003591 -
Eupl03g01884 902 MobiDBLite consensus disorder prediction 840 883 - -
Eupl03g01884 902 MobiDBLite consensus disorder prediction 473 495 - -
Eupl03g01884 902 MobiDBLite consensus disorder prediction 840 902 - -
Eupl03g01884 902 Gene3D Ribonuclease Inhibitor 286 394 IPR032675 -
Eupl03g01884 902 FunFam Predicted protein 490 594 - -
Eupl03g01884 902 MobiDBLite consensus disorder prediction 885 902 - -
Eupl03g01884 902 Gene3D Transferase(Phosphotransferase) domain 1 595 820 - -
Eupl03g01884 902 Pfam Leucine Rich Repeat 195 217 IPR001611 GO:0005515
Eupl03g01884 902 Gene3D Ribonuclease Inhibitor 26 186 IPR032675 -
Eupl03g01884 902 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 26 186 - -
Eupl03g01884 902 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 97 800 - -
Eupl03g01884 902 FunFam Leucine-rich repeat receptor protein kinase EMS1 187 285 - -
Eupl03g01884 902 FunFam Putative LRR receptor-like serine/threonine-protein kinase 595 819 - -
Eupl03g01884 902 SUPERFAMILY L domain-like 89 410 - -
Eupl03g01884 902 Gene3D Ribonuclease Inhibitor 187 285 IPR032675 -
Eupl03g01884 902 SUPERFAMILY Protein kinase-like (PK-like) 493 799 IPR011009 -
Eupl03g01884 902 Gene3D Phosphorylase Kinase; domain 1 496 594 - -
Eupl03g01884 902 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Eupl03g01884 902 Pfam Leucine rich repeat 266 327 IPR001611 GO:0005515
Eupl03g01884 902 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01884 902 Pfam Protein tyrosine and serine/threonine kinase 525 798 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01884 Eupl-Chr3 47298243 47310118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01884 28 691 Miscellaneous Gene Families AT2G16250 58.420 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Eupl03g01884 PK_Tyr_Ser-Thr 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01884 - - nnu:104595683 1190.25