Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01865 ATGGTGGTTGCCGGAAAACACACCGGAGAAGAAGACCGGAGCTCCGATAACTCTTTAGCGCATACACTATCGGAGAAAACTCCGTTTCTCGGGCTGAAGCTGTACGTCGTGATAGGAATATGCGTCGGTTGTTTGATCGCCATAGCTTTTCTGATTCTTCTATGTTTTCGTTCGAATCGAAACTCAAGAAGGCGTAGAATGCGTGTGAAGCACACTTCAAGTTTAATTCCGATGATCTCGAAGGATATCACAGAGATAAAAGCTTCGGATCGGGCGGAATACGGTAAGATCACCGACAAAGAGGAAAAGGAGAGAAAAAAGAAAGAGGAGAAAGGATTCTGTAGTGTGGTTGCGGATAAGGCGATTGGAACTGGAAATCGAAGCGCAGAGAGTAACTTATCTGGCGGTAGCCAGAGCTCATCATCGGCGGTATCGGTAGAGGTTCCAAATATCGGTTGGGGCCGGTGGTACCCGTTGAGAGAGCTGGAGATCGCTACCGGTGGATTTTCCGAAGAGAATGTGCTCGGAGAAGGAGGGTACGGAATTGTTTACAGAGGAGTTTTGGCGGATAGTTCTGTTGTTGCAGTGAAGAACCTTCTGAACAACAAGGGTCAGGCAGAGAAGGAGTTCAAGGTGGAAGTTGAAGCCATTGGAAAAGTAAGGCATAAAAACTTGGTGGGTCTTATTGGATATTGCGCAGAAGGTGTTCAAAGGATGCTCATATATGAATATGTTGATAATGGCAATTTGGAGCAATGGTTGCATGGTGATGTGGGGCCTATTAGCCCTCTGACATGGGATGTTCGAATGAAGATTGCAGTAGGGACAGCAAAGGGATTAGCCTATTTGCATGAAGGATTAGAACCAAAAGTTGTGCACCGAGATATCAAATCCAGTAACATTCTTCTGGATAAAAAATGGAACCCTAAAGTCTCAGATTTTGGACTGGCCAAGCTCTTGGGATCTGAAGCAAGCTATGTAACTACTCGTGTAATGGGAACATTTGGATATGTAGCTCCTGAGTATGCAAGCACGGGTATGCTTAACGAGGGCAGTGATGTGTATAGTTTTGGAGTTCTACTCATGGAGATAATCTCAGGAAGGAGCCCAGTTGATTATGGTAGACGACCTGGAGAGGTGAACTTGGTTGACTGGTTTAAAGGGATGGTAGCAACTAGGCGTGGAGAAGAAGTGGTGGACCCACTGATTGAAGTCCAGCCATCACCAAGAGCTTTGAAGCGGGTACTATTGGTATGCCTCCGCTGTATAGATTTGGATTCTAATAAGAGACCAAAGATGGGGCAAGTGGTACACATGCTTGAAGCAGATGAGTTTCCTTTCCGTGCGGAGCACCGATCAGCCCGGGACACAGCTCCTCTCCCTCCCCGTGGAGGCCCCGCTGTCACCAATAGGATTCCATACCCATCCGAGACTGCAGGGCGGAGGTAA 1449 0.472 MVVAGKHTGEEDRSSDNSLAHTLSEKTPFLGLKLYVVIGICVGCLIAIAFLILLCFRSNRNSRRRRMRVKHTSSLIPMISKDITEIKASDRAEYGKITDKEEKERKKKEEKGFCSVVADKAIGTGNRSAESNLSGGSQSSSSAVSVEVPNIGWGRWYPLRELEIATGGFSEENVLGEGGYGIVYRGVLADSSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCAEGVQRMLIYEYVDNGNLEQWLHGDVGPISPLTWDVRMKIAVGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKKWNPKVSDFGLAKLLGSEASYVTTRVMGTFGYVAPEYASTGMLNEGSDVYSFGVLLMEIISGRSPVDYGRRPGEVNLVDWFKGMVATRRGEEVVDPLIEVQPSPRALKRVLLVCLRCIDLDSNKRPKMGQVVHMLEADEFPFRAEHRSARDTAPLPPRGGPAVTNRIPYPSETAGRR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01865 482 SMART serkin_6 169 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01865 482 CDD STKc_IRAK 175 441 - -
Eupl03g01865 482 Gene3D Phosphorylase Kinase; domain 1 135 244 - -
Eupl03g01865 482 MobiDBLite consensus disorder prediction 451 482 - -
Eupl03g01865 482 FunFam Probable serine/threonine-protein kinase At1g01540 149 244 - -
Eupl03g01865 482 SUPERFAMILY Protein kinase-like (PK-like) 145 441 IPR011009 -
Eupl03g01865 482 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Eupl03g01865 482 PANTHER OS01G0323000 PROTEIN 16 454 - -
Eupl03g01865 482 FunFam Putative receptor-like serine/threonine-protein kinase 245 455 - -
Eupl03g01865 482 Gene3D Transferase(Phosphotransferase) domain 1 245 456 - -
Eupl03g01865 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Eupl03g01865 482 ProSiteProfiles Protein kinase domain profile. 169 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01865 482 Pfam Protein kinase domain 170 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01865 Eupl-Chr3 47081557 47088518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01865 35 443 Trihelix Transcription Factor Family AT1G70460 41.304 4.85e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl03g01865 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01865 - - nnu:104595699 699.123