Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01860 ATGGCATATATGTGCGCTGACAGTGGAAATCTAATGGCGATTGCTCAACAAGTCATCAAGCAGAAGCAACAACAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAACAGCTTCTTAACCCTAACCCTTTCTCACTAAACCCATGGGGGAGCAGCAACCATCCCATCAATAACCCTCCATCTTTAGGGTTTGGTCTCAGCGGCGCTGGATTCTCTGACCAATTTTTGGTCGGTGGGACTTCAGATACCGGCGACTCCGACCTCTCCTTCCCTCATTTGGATCATCATTCCACGGGGTTTAGACTCTCCGATTTGGGTGGAAGCACTGGTGGGGAGTTCGACTCGGACGAGTGGATGGAGAGTTTAATGGGTGGTGGTGGTGGTGAGTCGACGGAGAGCTCGGAGTTTCCATCCGGCGGAGATACGTGGCAGAGCAACACCGAGTTCGCTCTCTACGGCGGCGACCCCTTGGTTTCTTGCTCGAGTCGACTCACTCTCCCTTCCCCTCCGTCGGATCTCAACAGACTGGTCTACTCAGACACCCACAAAAATCCCAACTTTCAAGCTCAAATTCCTACGTGGGCCCCGCAACCGCCACCGCCGCCACAGGTGCCGGAGGAATCTGTGCCGCCAAATCCTCCCACGCAGACCTACCGGAAAAAGGAAATCACTAGCGTCTCATCTCTATCCCCTGAAACCGAGTCCGCTACTCCGCTGCTGAAATCCATCCTGGATTGCGCTCGACTTGCCGATTCCGATCCCGATCGCGCAGTGAAATCGCTGATTAGACTCCGGGAATCGGCGTCCGAACGTGGCGATCCCACGGAACGAGTCGCCTTTTACTTCTCTGAAGCTCTTTACAGTAGGCTTTCGTCGGAAGCTGGGAACAACTCACCTATGTTGGAGACCTCTTCAGAGGATTTCACGCTCTCTTACAAAGCTTTGAACGATGCCTGCCCGTATTCAAAGTTTGCTCATTTGACAGCGAACCAGGCGATACTCGAAGCGACCGAGTCAGCAACTCGGATACATATCGTTGATTTCGGAATCGTTCAAGGTGTTCAGTGGGCCGCGCTTCTCCAAGCTCTGGCAACTCGGTCCGCCGGGAAACCCACGAGAATCCGAATCTCTGGCATTCCCGCTCCGGCCCTTGGTAGATCACCGGCGGCGTCACTCTTTGCCACCGGTAATCGTCTCCGCGATTTTGCAAAGCTTCTTGATCTCAATTTCGAATTCGAACCCATTCTAACCCCGATACAGGAGCTCAAGGAATCGAGCTTCCAAGTCGGCCCAGATGAGGTTTTGGCCGTGAATTTCATGCTTCAGCTGTATAATTTATTGGGTGAGACTCCCGTTGCAGTGGAGAGAGCTCTCCGGCTCGCGAAATCGCTGAACCCGGATGTCGTAACCCTCGGTGAGTACGAAGCGAGCTTAAGTCGGGTCGGTTACTTAGACCGGTTTAAGAACGCGTTGAGGTACTACTCGGCCGTTTTCGAATCGCTCGAGCCAAGCTTGACAAGAGACTCGGCGGAGCGGCTCCGAGTGGAGAAATTGCTGCTTGGGCGGCGGATCGCCGGTGTAGTCGGTCGCGGAGAAGGTCCAACGAGACGGGAACGAATGGAAGAGAAAGAGCAATGGAGGGTTTTGATGGAAGGTTGTGGGTTCGAGTCGATCCCCCTCAGCCATTACACTGTTAGTCAAGCTAAGATTCTTCTCTGGAACTACAATTACAGTCCTAAATACTCTCTATTGGAATCATCACCTGGGTTTCTTTCGCTTGCGTGGAATGATGTTCTGCTTCTCACACTCTCCTCGTGGCATTGA 1824 0.5318 MAYMCADSGNLMAIAQQVIKQKQQQQQQQQQQQQQQQLLNPNPFSLNPWGSSNHPINNPPSLGFGLSGAGFSDQFLVGGTSDTGDSDLSFPHLDHHSTGFRLSDLGGSTGGEFDSDEWMESLMGGGGGESTESSEFPSGGDTWQSNTEFALYGGDPLVSCSSRLTLPSPPSDLNRLVYSDTHKNPNFQAQIPTWAPQPPPPPQVPEESVPPNPPTQTYRKKEITSVSSLSPETESATPLLKSILDCARLADSDPDRAVKSLIRLRESASERGDPTERVAFYFSEALYSRLSSEAGNNSPMLETSSEDFTLSYKALNDACPYSKFAHLTANQAILEATESATRIHIVDFGIVQGVQWAALLQALATRSAGKPTRIRISGIPAPALGRSPAASLFATGNRLRDFAKLLDLNFEFEPILTPIQELKESSFQVGPDEVLAVNFMLQLYNLLGETPVAVERALRLAKSLNPDVVTLGEYEASLSRVGYLDRFKNALRYYSAVFESLEPSLTRDSAERLRVEKLLLGRRIAGVVGRGEGPTRRERMEEKEQWRVLMEGCGFESIPLSHYTVSQAKILLWNYNYSPKYSLLESSPGFLSLAWNDVLLLTLSSWH* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01860 607 MobiDBLite consensus disorder prediction 192 212 - -
Eupl03g01860 607 Pfam GRAS domain family 241 606 IPR005202 -
Eupl03g01860 607 MobiDBLite consensus disorder prediction 186 232 - -
Eupl03g01860 607 Coils Coil 12 35 - -
Eupl03g01860 607 MobiDBLite consensus disorder prediction 21 60 - -
Eupl03g01860 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 222 600 IPR005202 -
Eupl03g01860 607 ProSiteProfiles GRAS family profile. 230 607 IPR005202 -
Eupl03g01860 607 MobiDBLite consensus disorder prediction 21 61 - -
Eupl03g01860 607 MobiDBLite consensus disorder prediction 213 232 - -
Eupl03g01860 607 MobiDBLite consensus disorder prediction 97 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01860 Eupl-Chr3 46974895 46977815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01860 1 606 GRAS Transcription Factor Family AT5G66770 61.275 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl03g01860 GRAS 2.4e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01860 - - ming:122083205 801.201