Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01858 ATGACTGAACTAGAGCTTCTTCTCTTGCTTCCTCCAGCAATTTTAGTTCTAGTAGTTCTCATCTGGGATCTCATTAAAAGGAAGAAAAAATCATATAAACTTCCACCAGGAAACATGGGTTGGCCTTTTCTCGGCGAAACTATCGGTTATTTGAGGCCTTATTCAGCTACTACTATTGGAGAATTCATGGAGCAACACGTATCAAGGTATGGAAAGATCTACAAGTCGAATTTGTTCGGTGAGCCGACGATTGTTTCTACTGATGCGGGGCTAAATCGTTTTGTATTACAAAACGAGGGGCGCTTGTTCGAATGCAGTTATCCAAGGAGTATAGGTGGGATTCTTGGTAAATGGTCGATGTTGGTTGTGGTCGGAGACATGCATAGAGACATGAGGACGATCTCTCTCAACTTCATGAGCAGTGCGAAGCTTCGAACACACCTATTGCAAGAGGTAGTTAGGCATACCTTGCTGGTTCTAAGATCTTGGAAGGAGAATTCCACCTTTTCTGCCCAAGATGAAGCAAAGAAGTTTACTTTCAATTTGATGGCGAAATATATCATGAGCATGGATCCTGGAAAACCGGAAACCGAGCAGCTGAAGAGAGAGTACATTACGTTCATGAAAGGAGTGGTATCTGCGCCTTTGAATTTTCCTGGAACTGCATATAGAAAGGCATTACAGTCAAGATCAAGCATCCTTAAAATTATCGAGCGTAAAATGCGAGAGAGAATTCAGGATATGAACGATAATCGCGAAGAAATCAAAGAAGATGATCTTCTTGGATGGGTACTGAAGCATTCGAATCTTTCGACGGAACAAATTCTCGATTTGATACTGAGCTTGCTTTTCGCCGGTCACGAAACATCCTCAGTAGCCATATCTTTAGCTATCTACTTCTTGCAAGCTTGTCCCAGAGCAGTTCATGAGTTGAGGGAAGAGCACATTGAAATTGCTAGAGCTAAGAAACAAGCAGGAGAGTCTGAAATGAATTGGGAAGACTACAAACATATGGAATTCACCCAATGTGTTATCAGCGAGACACTTCGGCTCGGCAACGTCGTTAGGTTCATACACAGAAAGGCTCTCAAAGATGTCCAATACAAAGGTAAGACAATCCGACGACTAGTCGCATTTCTCACTGGAACTCACCGGAATCTGACCCATTTTTTTGAATTTTATTATGGTATATGCGTTAAAGGATATGACATTCCATGTGGGTGGAAAGTTCTTCCAGTGATCTCAGCCGTGCATTTGGATCCTTTGATTTACGATCAACCTCAACTCTTCAATCCATGGAGATGGCAGAGTACAAGTAATATGGGTGCTTCTTCTTTTTCGAGCACGGCGACGACCAACAACTTCATGCCATTTGGGGGTGGACCACGGCTATGCACGGGGTCAGAACTAGCCAAGCTGGAGATGGCCATGTTCATCCACCACCTGGTCCTGAATTACCATTGGGAGTTAGCGGAACCCGATCACGCTCTAGCTCACCCATTCGTCGACTTCCCGAAAGGCCTACCAATCAAAGTCTACCACCACACCCTCATATAA 1557 0.438 MTELELLLLLPPAILVLVVLIWDLIKRKKKSYKLPPGNMGWPFLGETIGYLRPYSATTIGEFMEQHVSRYGKIYKSNLFGEPTIVSTDAGLNRFVLQNEGRLFECSYPRSIGGILGKWSMLVVVGDMHRDMRTISLNFMSSAKLRTHLLQEVVRHTLLVLRSWKENSTFSAQDEAKKFTFNLMAKYIMSMDPGKPETEQLKREYITFMKGVVSAPLNFPGTAYRKALQSRSSILKIIERKMRERIQDMNDNREEIKEDDLLGWVLKHSNLSTEQILDLILSLLFAGHETSSVAISLAIYFLQACPRAVHELREEHIEIARAKKQAGESEMNWEDYKHMEFTQCVISETLRLGNVVRFIHRKALKDVQYKGKTIRRLVAFLTGTHRNLTHFFEFYYGICVKGYDIPCGWKVLPVISAVHLDPLIYDQPQLFNPWRWQSTSNMGASSFSSTATTNNFMPFGGGPRLCTGSELAKLEMAMFIHHLVLNYHWELAEPDHALAHPFVDFPKGLPIKVYHHTLI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01858 518 CDD CYP90-like 66 514 - -
Eupl03g01858 518 Coils Coil 238 258 - -
Eupl03g01858 518 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PANTHER CYTOCHROME P450 26 31 500 - -
Eupl03g01858 518 Gene3D Cytochrome P450 25 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 Pfam Cytochrome P450 399 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 Pfam Cytochrome P450 35 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl03g01858 518 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01858 Eupl-Chr3 46921594 46925626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01858 26 439 Cytochrome P450 AT3G50660 70.575 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01858 K09587 - cave:132188356 780.015