Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01853 ATGCTCCCTCCTGCCTCTTCTCCTCTTGCTCCTCCTTTTCTTGATATTACTCCTGCTTTTATTGACAAATCCGGTCTTCTGGTCCTCTTTTTGATCTTCGTTGTTATTGTTTACTCGCTCGGCTATTTTTGCACCCAATGCCAACGTACCAGCCATGGTCAATCCGATCATGTAACAAGAAACCTAGATCTCGAGATTGGAGAATCAAATGTAGGAAATCGTGGCAGAATTTCCAATCAATGGAGGCAAATTCAACAAAATTTTCAACGGAATATCCCAAATCCTTGGATAGCAGGAGGAAGTAGTGGAGATCGTCGCAGTTGCGAGATACCCATGCAAAATTTACGAAATTCACTACAGAGGGCTGCACTGTCCGACTACACAAGCGATCCATCATCTGGGTGCGCTATTTGCTTGGAGGGTTTTGAAGTAGAAGGAAAGAAGTTCGGCGTTCTTCCAAGGTGCAAACACATGTTTCATACTGAATGTATCAATGAATGGTGCAGAGAATCAAAAAAAACGTGCCCGATTTGCCGGATTGTTATTGTAGTTCTCTATCATTGA 564 0.4291 MLPPASSPLAPPFLDITPAFIDKSGLLVLFLIFVVIVYSLGYFCTQCQRTSHGQSDHVTRNLDLEIGESNVGNRGRISNQWRQIQQNFQRNIPNPWIAGGSSGDRRSCEIPMQNLRNSLQRAALSDYTSDPSSGCAICLEGFEVEGKKFGVLPRCKHMFHTECINEWCRESKKTCPICRIVIVVLYH* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01853 187 SUPERFAMILY RING/U-box 117 184 - -
Eupl03g01853 187 SMART ring_2 135 178 IPR001841 -
Eupl03g01853 187 ProSiteProfiles Zinc finger RING-type profile. 135 179 IPR001841 -
Eupl03g01853 187 Pfam Ring finger domain 135 179 IPR001841 -
Eupl03g01853 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 183 IPR013083 -
Eupl03g01853 187 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 28 181 IPR044675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01853 77 179 C3H Transcription Factor Family AT5G66070 31.429 2.19e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01853 - K15692 rcn:112173730 66.6254