Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01851 ATGCTCCTCCACTCGCTCTACATCCCAACGGTCTGCTCCATCTCTCCCAACAAAAAACCTTATCCTCTTCGTTCTTCTTCTCCATCTCCACACCCTCCCCTTCTCCTCCGATTCCGTACTTCCCACCGCGAAAATCTTCGATACCTCAAAACCCTAGGTATCATATCCAACGACAACAGCAACACCAAGTTCTTCTCCCCAGAAACCCTAGATCAAATCCTCTCCATCGTAAATTTCCTCAAATCCAAGGGATTTTCCGACCCCCACTTCCAGAGACTCGCTTTTCTCTGCCCTAAACTCTTCTCCTCCAACGTCGATCCAACCGACATCGATCCCGTCTTCGACTTCTTGACCATCGATCTCTCAGCGTCTACCCACGAAGTGTGCGGTCTGATTCTCCGATGCCCTGAAATTCTCTTCTCAGATGTCGATTTCTGTCTGAGACCCACACTTCTATTTCTCAGGGAATTAGGACTAGAGAAGCTCAATTCGCCTACTACTCTCAATGCTCACCTACTGAACACCCGCGTAGCAAAACTTGTCACAAAGATTAGGTTTTTGGAGAGCTTAGGGCTTTCGTACGAGGAGTCCGCAAGGGTTTGTGCTCGGTTGCCTGCGATTTTTGGTTACAGCGTCGAGAATAATCTGAGGCCTAAATTCGAGTATTTAGTGGAGGAGATGGAGAGGAGTGTCGAAGAATTGAAGGGGTTTCCACAATACTTTGCTTTCAGTCTGGATAAACGGATAATTCCAAGACATTTGCATTTGAAGGAGAGGAACGTTCGTGTACCATTGCAGAGGATGTTGTTGTGGAGCGATCAACGATTTTACTTGAAATGGAAGTGA 846 0.4704 MLLHSLYIPTVCSISPNKKPYPLRSSSPSPHPPLLLRFRTSHRENLRYLKTLGIISNDNSNTKFFSPETLDQILSIVNFLKSKGFSDPHFQRLAFLCPKLFSSNVDPTDIDPVFDFLTIDLSASTHEVCGLILRCPEILFSDVDFCLRPTLLFLRELGLEKLNSPTTLNAHLLNTRVAKLVTKIRFLESLGLSYEESARVCARLPAIFGYSVENNLRPKFEYLVEEMERSVEELKGFPQYFAFSLDKRIIPRHLHLKERNVRVPLQRMLLWSDQRFYLKWK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01851 281 SMART mt_12 165 193 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 SMART mt_12 91 124 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 SMART mt_12 198 230 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 PANTHER CGI-12 PROTEIN-RELATED 69 279 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 Gene3D Transcription termination factor 3, mitochondrial 34 281 IPR038538 -
Eupl03g01851 281 Pfam mTERF 114 276 IPR003690 GO:0003690|GO:0006355
Eupl03g01851 281 FunFam Transcription termination factor MTEF1, chloroplastic 40 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01851 Eupl-Chr3 46810881 46813988 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl03g01851 mTERF 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01851 K15031 - psom:113289245 402.134