Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01847 ATGGCTTCGTCCCCTGTGACTGCTCCGTCACCAGATTCTCCATCTTCTCCTACTCCCCCATCGTCGTCATTATCCCCGCCTCCAATATCATCGTCCTCACCGCCACCACAACCCCCAACGACATCAACGCCACCTCCAGCAACATCACTGCCACCCCCAGCAACATCATCGCCACCTCCAAAATCACTGCTACCCCCAGCGACATCGTCGCCACCTCCAGCAACATCACCACCACCTCCAGCAACATCACCACCACCTCCAATAGTACCACCAGCCAAATCATCGCCACCTCCTACAACACCACCACCCCAAAAAACACCACCCACATCTCCACCTACACATGCATCTCCAGCCCCAAAGGTGTCACCACCCCCACAATCAACAAGTTCTTCTCCCTCACCACCAGCAGCAGAAAATTCTTCCCCATCGCCACCCCCTCCATCTTCAAACAACAATCCTACTCCACCGTCATCATCCAATGTCGACATTCCACCACCTCCAGACATTCCACCACCTCCACAATCCCAATCGACATCTACACCATCTTCTTCTGGGGCATTGTCGCCTAAGCATGCACCGACACGTGGGACACCATCACATTCTAGGAGTTCGCCGCCACCACCGCAACAAGATTCCATTACTGACAAATTACCCATTATAGTAGGGATCACAGCAGGGGTAGGGATCCTATTTATTATTATGATTGTCATCTTTGTGTGTTGCGCCAAGACGAAGAAGAAGAGAAGACGAGTACCACATGACAACATGCAATACTATAATGACCCTTCTCGTGGGCCCAAAGGTAGTGAATATTACAATAGCGCGCAACATCAGAGTTGGCACAACAGCCCCCAATTGAAGGTGCCCCCTCCTCCAGGCTCATTGGGGCCACCCGGTGGAGGATGGCCTCAACCACCTCCACCTCCCCCCATGATGAGTAGCAGTGAAATGAGCCCTGATTTCTCTGCAGCATCACGTTATCCAGACTTACACTCCCCGTCTCCAAACCTCTCTCTAGGATTTAACAAAAGTACCTTCACTTATGATGAGCTAGCGGCAGCAACAAACGGCTTCTCTCAAAATAACTTATTGGGTCAAGGTGGGTTTGGATACGTACACAAGGGTGTCTTGCCTAACGGAAAAGTGATAGCAGTGAAGAGCCTCAAGTCAGGTAGCGGGCAAGGAGAACGGGAGTTCCAAGCAGAGGTTGATATCATTAGCCGTGTCCATCACCGCCACCTCGTATCGCTCGTCGGATACTGTATAGCGGGTGGGCAGCGGATGTTGGTCTACGAATTTGTTCCTAATAATAACCTGGAATACCACCTCCATGGAAAGGGTCGTCCAACCATGGACTGGTCTAACAGGCTCACGATTGCGGTGGGAATGGCAAAAGGGCTTGCATACCTTCATGAAGATTGCCACCCTCGCATCATCCACCGTGATATAAAAGCTGCTAATATTCTCCTTGACGATAATTTTGAAGCCATGGTGGCGGATTTCGGATTGGCTAAGCTGTCCTCGGACATTCACACTCACGTCTCAACACGTGTCATGGGTACTTTCGGGTATTTGGCTCCTGAATACGCATCGAGTGGCAAGCTAACTGATAAATCTGATGTTTTCTCATTTGGTGTTATGCTTTTGGAATTGATTACGGGACGACGACCCGTGGATACTACTAATATGTACATGGAAGATAGCTTAGTAGATTGGGCTAGGCCTATTCTGACCCGGGCTATAGGGGATGGACACTACGGTGAATTAGTAGATCTACGCTTGGAGAACCACTACAATCCTAATGAAATGGTGCGCATGATAGCATGTGCTGCTGCATGCATTCGTCATTCTGCAAAAAGGCGTCCGAAAATGAGCCAGATAGTACGTGCATTAGAAGGCGATGTCTCATTGGAGGACTTGAACGAGGGAGTGAAACCCGGCCAAAGCTCTATGTTTAGCTCTAGTACTGGAAGCTCAGGGCATGATACGAGGACATATAGTGCGGACATGAAGAAGTTCATGAAAGTGGCATTGACTAGCCAGGAATTCGGGGGTAGCGAATACAGCGGGGCCACAAGTGACTATGGGCTATACCCCTCCTCGAGTAGTGAGAGCGCGCACTCTAGCGAAATATGA 2136 0.5014 MASSPVTAPSPDSPSSPTPPSSSLSPPPISSSSPPPQPPTTSTPPPATSLPPPATSSPPPKSLLPPATSSPPPATSPPPPATSPPPPIVPPAKSSPPPTTPPPQKTPPTSPPTHASPAPKVSPPPQSTSSSPSPPAAENSSPSPPPPSSNNNPTPPSSSNVDIPPPPDIPPPPQSQSTSTPSSSGALSPKHAPTRGTPSHSRSSPPPPQQDSITDKLPIIVGITAGVGILFIIMIVIFVCCAKTKKKRRRVPHDNMQYYNDPSRGPKGSEYYNSAQHQSWHNSPQLKVPPPPGSLGPPGGGWPQPPPPPPMMSSSEMSPDFSAASRYPDLHSPSPNLSLGFNKSTFTYDELAAATNGFSQNNLLGQGGFGYVHKGVLPNGKVIAVKSLKSGSGQGEREFQAEVDIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNNNLEYHLHGKGRPTMDWSNRLTIAVGMAKGLAYLHEDCHPRIIHRDIKAANILLDDNFEAMVADFGLAKLSSDIHTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTNMYMEDSLVDWARPILTRAIGDGHYGELVDLRLENHYNPNEMVRMIACAAACIRHSAKRRPKMSQIVRALEGDVSLEDLNEGVKPGQSSMFSSSTGSSGHDTRTYSADMKKFMKVALTSQEFGGSEYSGATSDYGLYPSSSSESAHSSEI* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01847 711 MobiDBLite consensus disorder prediction 178 199 - -
Eupl03g01847 711 MobiDBLite consensus disorder prediction 642 663 - -
Eupl03g01847 711 SUPERFAMILY Protein kinase-like (PK-like) 331 631 IPR011009 -
Eupl03g01847 711 ProSiteProfiles Protein kinase domain profile. 358 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01847 711 Pfam Protein tyrosine and serine/threonine kinase 361 631 IPR001245 GO:0004672|GO:0006468
Eupl03g01847 711 Gene3D Phosphorylase Kinase; domain 1 330 433 - -
Eupl03g01847 711 MobiDBLite consensus disorder prediction 267 284 - -
Eupl03g01847 711 MobiDBLite consensus disorder prediction 1 214 - -
Eupl03g01847 711 SMART serkin_6 358 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01847 711 FunFam Proline-rich receptor-like protein kinase PERK1 434 642 - -
Eupl03g01847 711 MobiDBLite consensus disorder prediction 690 711 - -
Eupl03g01847 711 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 226 676 IPR047117 -
Eupl03g01847 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Eupl03g01847 711 MobiDBLite consensus disorder prediction 285 314 - -
Eupl03g01847 711 Gene3D Transferase(Phosphotransferase) domain 1 434 643 - -
Eupl03g01847 711 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Eupl03g01847 711 MobiDBLite consensus disorder prediction 10 177 - -
Eupl03g01847 711 MobiDBLite consensus disorder prediction 249 329 - -
Eupl03g01847 711 FunFam proline-rich receptor-like protein kinase PERK1 336 433 - -
Eupl03g01847 711 CDD STKc_IRAK 364 633 - -
Eupl03g01847 711 MobiDBLite consensus disorder prediction 646 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01847 Eupl-Chr3 46750692 46756139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01847 181 711 Trihelix Transcription Factor Family AT1G70460 48.812 1.14e-167 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Eupl03g01847 PK_Tyr_Ser-Thr 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01847 - - psom:113333716 686.026