Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01812 ATGAGATCTCCCTTCACCACCACTCAAAACCATCAATTTCTCCACCCAAAACCGCTTACCTGCAACCTAACCACCAATACGGCTTTCAGCAACCCCAACAATACCGCTCAATCGTGCTACGAACCCACCTCGGTGTTGGATCTCCGTCGGAGCCCAAGCCCTGTAGCCGGTGGGTCTGATTCCGTTCCTGGGTTTACGGCCGTCTCCGGCATGTCGGATGAGTCTCCTCTTCACTGGGACGAGCATGTATTACATCCTCCTCCGTTGTTGCCATCCGACGACTGGGATTCCATGGTGTGGGGATTAGGGGAAAAAAACGATTCTGCCCATACTCTAAAAAATATACCCCAATTCGGTCCCTTTGAATCCCCAAATCCAAATCTCCATCACTTCCCATCTTCTGATCCATTTGATCCTTCCCCGTTTGCTCTCAATGATTTCAATATCCCAGCTCTCTCTTCAAATCAGAATCTGAATCAGAGTTCGAATTTCAATCCCCACAACGATTTCTATCAGTTACAGAGCGGCGGAGGCGGAAGTAGCGGTGATTCGAACCTCGAATTCGATTGCTCACAGTTGGATCAGCTGATTCGAGCTGCAGCGTCTGTGGATTCGAACGAATTACAGCTCGCGCAAGTGATATTGGCGCGGCTCAATCAACGCCTGCAATCTCCCATCGGAAAACCACTACAAAGAGCAGCCTTTTACTTTAAAGAAGCCCTCCAATTGTTCCTCACCTCGAATTGGGCGGTTCACCTCTCATCTTCAGATATAGTTCAAAAGATCAAAGCGTATAAGGCCTTCTCGGAGATCTCTCCAATGGCTATGTTCGCTAATTTCACTGCAAATCAAGCTGTTCTCGAAGCTTTGGATGGGGCGATGTTCATCCATGTCATAGATTTTGAGATTGGGCTCGGAGGGCAATGGGCGTCGTTCATGCAAGAAATCGCAAATAAAGCTAAGTCTCGTAACGTTACTCCTTCCGCTCTTCGAATTACTGCTGTAGTACCAGAAGAATCCTCAACGGAGGCCAGGCTGATTAAAGATAATCTCCAGCAGTTCGCGCGAGAGCTCGGAATTCGATTCCAGCTTGAATTCATCCTCTTTCATTCTTTCGAAGTCCTATTTTTCAACGCGATCAGGTTCATCAATGGAGAACTGATCGCCGTAAATCTCTCACCGGCGATCTTCCGACATCTCGGATCTTCAGAGTCCATCGCCGGATTCCTCCGGATTCTTCAACGGATCTCGCCACAAATCACTGTGTTCGTCGATACCGAAGGCTGGAGAGACGCTGGAGCTCCATCGTTCCGCCGGAATTTCATCAACGGGCTTGAATTCTATTCGGCTATGCTCGAATCGCTCGACGCATCTAACACCGGCGGCATAGATTTGATGCGAAGAATTGAGAGGTTTCTTCTTCGGCCAAAGATAATCTCCACCGTCGCCGCAGCTGGAAATCGTATATTGCCATGGCGGGAGCTATTTTCCAGTGCTGGAATGTTGCCTGTCCAGTTCAGTGAGTTTACCGATTCTCAGGCCGATTGTCTAGTGAGGAGAGCCCAAGGCAGGGGATTCCACGTGGCGAAACATCAAGGAGAGATGCTGCTGTGTTGGCATGAGAGGGAGTTGGTTGCCACGTCAGCCTGGAGGTTTTAG 1659 0.4931 MRSPFTTTQNHQFLHPKPLTCNLTTNTAFSNPNNTAQSCYEPTSVLDLRRSPSPVAGGSDSVPGFTAVSGMSDESPLHWDEHVLHPPPLLPSDDWDSMVWGLGEKNDSAHTLKNIPQFGPFESPNPNLHHFPSSDPFDPSPFALNDFNIPALSSNQNLNQSSNFNPHNDFYQLQSGGGGSSGDSNLEFDCSQLDQLIRAAASVDSNELQLAQVILARLNQRLQSPIGKPLQRAAFYFKEALQLFLTSNWAVHLSSSDIVQKIKAYKAFSEISPMAMFANFTANQAVLEALDGAMFIHVIDFEIGLGGQWASFMQEIANKAKSRNVTPSALRITAVVPEESSTEARLIKDNLQQFARELGIRFQLEFILFHSFEVLFFNAIRFINGELIAVNLSPAIFRHLGSSESIAGFLRILQRISPQITVFVDTEGWRDAGAPSFRRNFINGLEFYSAMLESLDASNTGGIDLMRRIERFLLRPKIISTVAAAGNRILPWRELFSSAGMLPVQFSEFTDSQADCLVRRAQGRGFHVAKHQGEMLLCWHERELVATSAWRF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01812 552 ProSiteProfiles GRAS family profile. 183 551 IPR005202 -
Eupl03g01812 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 163 547 IPR005202 -
Eupl03g01812 552 Pfam GRAS domain family 194 551 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01812 Eupl-Chr3 46272973 46275143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01812 77 552 GRAS Transcription Factor Family AT4G36710 48.790 1.83e-137 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl03g01812 GRAS 7.5e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01812 - - psom:113308959 622.083