Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01811 ATGGAGCTTCCTCCGTATGACCCGGATTGGTACTATGTTAGAGCTGCATCCATGGCGAGGAAGATCTACTTGAGGCAGGGTATTGGGGTTGGTGGTTTCCAGAAGATCTATGGTGGACGCAAGAGGAATGGGAGTCGTCAACCCCATTTCTGCAAGAACAGTGGTGCAATTGCCCGTAACATCCAGCAATAG 192 0.5052 MELPPYDPDWYYVRAASMARKIYLRQGIGVGGFQKIYGGRKRNGSRQPHFCKNSGAIARNIQQ* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01811 63 Gene3D - 1 63 IPR036388 -
Eupl03g01811 63 PANTHER 40S RIBOSOMAL PROTEIN S19 2 61 IPR001266 GO:0003735|GO:0005840|GO:0006412
Eupl03g01811 63 SMART Ribosomal_S19e_2 2 63 IPR001266 GO:0003735|GO:0005840|GO:0006412
Eupl03g01811 63 Pfam Ribosomal protein S19e 2 63 IPR001266 GO:0003735|GO:0005840|GO:0006412
Eupl03g01811 63 SUPERFAMILY "Winged helix" DNA-binding domain 2 61 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01811 Eupl-Chr3 46268306 46268630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01811 2 63 Cytoplasmic Ribosomal Protein Gene Family AT5G15520 79.032 2.16e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01811 K02966 - aof:109834433 124.02