Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01807 ATGGCGGAACGAGTGGGTTCTGGAAAAGAACCCTCGAATCCTTCTTGCATTAATCCCAACGAAAACAACGGAAATGGGGTTGCTAGTGAAGCCAAAGACGACAACCCCATTGTCCATTACGATTATATTTCGATCGACCAGAGCTTGCTAATCGATCCCAACGACCTTTCCATCCGCTCCATGATCAGTGAAGGCTCTCACTCCATTGTCTACTCGGGCTCGTACAAAAACATGTCTGTTGCTGTGAAGGTAATGCAACCAGCTCAACCATCCGCTGTGAGTCCAGAGTGCAAAGAGAAGTTTGTAAGAGAGGTTATGATGCTATCTCGGGTGAAGCACGATAATCTTGTGAAGTTTATTGGAGCGTCAATAGAACCGAATATGCTGATAGTCACAGAGCTTATGAGGGGTGGTACACTAAAGAAGTATTTGTGGGATACACGTCCAAATTGTCTGGATCTGCAGCTCTCTATAAGTTTCGCGTTAGATGTCTCTCGAGTAATGGAATGCTTACATGCAAGTGGCATCATTCACCGTGACCTGAAGCCCGATAATCTGCTTCTCACAGAAGATCATAAGAAAATTAAACTAGCTGACTTTGGGTTAGCTAGGGAGGAGACAGTTGAAGAAATGATGACTTCTGAGGCTGGTACGTACCGATGGATGGCTCCCGAGTTGTTCAGCACAGTCCCACTTCGACGTGGAGAGAAGAAACACTATGATCATAAGGTCGACATCTACAGCTTCTCCATAGTTTTATGGGAGTTGCTAACGAATTGCACGCCTTTCAAGGGGATGTCAAGCATACAGGCAGCATATGCTGTAGCTAAGAAAGTAAGGCCTAGTGTGAATGACATTCCGGAGGATCTTGTCCCTCTCTTGGAGTCCTGTTGGGCAGAGGAGCCAGCCAGCCGACCAGAGTTCATGGTGATATCCAACACTCTGTCAGACATCCTCGACAACCTGCTTTCGGAACAGACCATGTCTCCACAGGTGAACGAGGTTGAACGGAAAAACGCCCTTGTGGCTAATTCCCCTGGCACCCGTCATCTGATCGACAAGTACGAAGAGATGGAGGGGAGGAAGTCGAGAAGCTCATCCCCCAGCTTCCTCAGTTGCTTCGACAAATGTTTCGCAAAATGA 1143 0.4733 MAERVGSGKEPSNPSCINPNENNGNGVASEAKDDNPIVHYDYISIDQSLLIDPNDLSIRSMISEGSHSIVYSGSYKNMSVAVKVMQPAQPSAVSPECKEKFVREVMMLSRVKHDNLVKFIGASIEPNMLIVTELMRGGTLKKYLWDTRPNCLDLQLSISFALDVSRVMECLHASGIIHRDLKPDNLLLTEDHKKIKLADFGLAREETVEEMMTSEAGTYRWMAPELFSTVPLRRGEKKHYDHKVDIYSFSIVLWELLTNCTPFKGMSSIQAAYAVAKKVRPSVNDIPEDLVPLLESCWAEEPASRPEFMVISNTLSDILDNLLSEQTMSPQVNEVERKNALVANSPGTRHLIDKYEEMEGRKSRSSSPSFLSCFDKCFAK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01807 380 Gene3D Transferase(Phosphotransferase) domain 1 35 348 - -
Eupl03g01807 380 Pfam Protein tyrosine and serine/threonine kinase 57 314 IPR001245 GO:0004672|GO:0006468
Eupl03g01807 380 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Eupl03g01807 380 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Eupl03g01807 380 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672|GO:0006468
Eupl03g01807 380 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Eupl03g01807 380 ProSiteProfiles Protein kinase domain profile. 56 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01807 380 MobiDBLite consensus disorder prediction 1 31 - -
Eupl03g01807 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Eupl03g01807 380 SUPERFAMILY Protein kinase-like (PK-like) 47 330 IPR011009 -
Eupl03g01807 380 MobiDBLite consensus disorder prediction 11 29 - -
Eupl03g01807 380 CDD STKc_MAP3K-like 62 315 - -
Eupl03g01807 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 326 - -
Eupl03g01807 380 SMART serkin_6 56 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01807 Eupl-Chr3 46214274 46220663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01807 51 378 MAP Kinase Kinase Kinase AT5G50180 54.217 4.84e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl03g01807 PK_Tyr_Ser-Thr 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01807 - - msin:131229797 442.195