Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01804 ATGAACAGAGTGGATGATCATGAAATGTCACTCTTCTCTCAGCTGCATCCCTGTATATTCACAATGGTACCAAATGAAGAGCCGAAATCGCGTCGACGGCGTAAGAAGAGCAAAGGAGAAGCGAGCAATGTATGCATGAGGAAGAGGAAGTTGAGCAATGAGCAAGTTCATCTCCTTGAGATGAATTTTGGTACTGAACATAAGTTGGAGTCGGAGAGAAAGGATCGTATTGCTTCGGAGCTCGGTTTAGACCCTCGACAAGTTGCGGTATGGTTTCAGAATAGAAGGGCTAGGTGGAAGAGTAAGAAACTAGAGGAGGAGTACTCGAAGCTTAAGACGGCACACGACGGTGCTATCGTCGACAAGTTCCGGCTCGAAGCCGAGGTATTGAAGCTTAAGGAACAGCTCTCAGAAGCGGAGAAAGAAATACGAAGGCTGTCGGAGCGTTCGGACGGTATCTCGAGCAGTAGCCCAAGTTCGTCGTTTTCCATGGACGGCGCCGAACCGCCGTTTCTCGGAGAATTCGGAGTGGAAGGATTTGAGAACTTTTTTTATTTACCAGAAAATAGTTATAATCATGGGATGGAGTGGGTGAATCTGTATGACTTGTGA 612 0.4706 MNRVDDHEMSLFSQLHPCIFTMVPNEEPKSRRRRKKSKGEASNVCMRKRKLSNEQVHLLEMNFGTEHKLESERKDRIASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKTAHDGAIVDKFRLEAEVLKLKEQLSEAEKEIRRLSERSDGISSSSPSSSFSMDGAEPPFLGEFGVEGFENFFYLPENSYNHGMEWVNLYDL* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01804 203 MobiDBLite consensus disorder prediction 150 164 - -
Eupl03g01804 203 SMART HOX_1 45 106 IPR001356 GO:0003677
Eupl03g01804 203 ProSitePatterns 'Homeobox' domain signature. 77 100 IPR017970 GO:0000981|GO:0006355
Eupl03g01804 203 MobiDBLite consensus disorder prediction 23 43 - -
Eupl03g01804 203 CDD homeodomain 47 103 IPR001356 GO:0003677
Eupl03g01804 203 SUPERFAMILY Homeodomain-like 48 109 IPR009057 -
Eupl03g01804 203 PRINTS Lambda-repressor HTH signature 73 82 IPR000047 GO:0003677
Eupl03g01804 203 PRINTS Lambda-repressor HTH signature 82 98 IPR000047 GO:0003677
Eupl03g01804 203 Coils Coil 122 156 - -
Eupl03g01804 203 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 33 160 IPR045224 GO:0003700
Eupl03g01804 203 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Eupl03g01804 203 Gene3D - 40 110 - -
Eupl03g01804 203 Pfam Homeodomain 48 100 IPR001356 GO:0003677
Eupl03g01804 203 Coils Coil 94 114 - -
Eupl03g01804 203 MobiDBLite consensus disorder prediction 147 166 - -
Eupl03g01804 203 FunFam homeobox-leucine zipper protein ATHB-40 41 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01804 Eupl-Chr3 46184594 46186061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01804 4 201 Homeobox Transcription Factor Family AT4G36740 57.075 1.99e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl03g01804 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01804 K09338 - nnu:104595754 246.514