Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01780 ATGGATCTCCAATCCCTCATCTCTCTCTGCATTTTCTCTCTCATTTCTTCCTCTTTTCTGGTTCATGCCCAGCAGCTTTATGTGAGAAAGGCCACCACAGATTGTGAAAACATAGATAATTCAACTTCTGTTCTGGGGTACACCTGTAATGGCCAAAACCCAAGTTGCCAAGCTTACCTGATCTTCAGATCTCAACCCCCATACAACTCTGTTTCTTCCATCTCTGATTTCATGGCCTCTGACCCATCTCAGCTCTCTCAAATTAACTCAGTTTCTGAGACTGCAACCTTTGAAACAAACAAGGAGGTGATTGTTCCTGTCAATTGTTCTTGTTCAGGTCAGTACTATCAAGCAAATTCATCTTATGTTGTTAAACATGATAATACTTATCTTTTAATAGCAAATGATACCTACCAAGGTCTCTCAACCTGCCAAACTCTCCAGGATCAGAACAGCCATTTGCCTAAGAACTTGTATAGTGGTACAAGGATTACTGTTCCTCTTAGGTGTGCTTGTCCTACAAAAAATCAAACTGATGAGGGCGTTAAGTATCTGTTGAGTTACACAGTCAATTGGGGTGATTTTGTTTCAAGTATAAGCCAGAAGTTTGGTGTGGATACTGGGAGCACTCTTGAAGCTAATGAGCTTTCTGATCAAGACAGCGTCATTTATCCGTTTACGACTCTTCTTGTTCCTCTGCAGAATTCGCCGTCAAGTTCTCAAACCATAGCACCACCACCACCCCCATCTACTCCCCAAACTCCTCCTACTCCATCAGATAAAAAGAAGAAAACTTGGGTTTATGTTATTATTGGAGTTGTTGCAGGGGGTGCTGTTCTGTTGGTTGTCTCCGCCATCGTTTTCTACGTCTTCTTCTTCCGTAAAAGTAAGAGGAGCCAAGCTGATCCAATTATCGTCTCGGAGAGCTATGAGAGTAATGAGAAACCAATTGAGAAGAAAGTAGAGGAAGAATCTGAAGAGTTTCTCGAGAGTATATCTGAGATTGCTAATTCCTTGAAAGTGTATAAATTTGAAGACCTGCTATCAGCAACAGAGAATTTCAGCCCCAATTGTTGGATCAAGGGGTCTGTTTATCGGGGTACCTTTTATGGGGACTTCGCCGCCATTAAGAAGATGAATGGGGATGTGTCGAAAGAAATAAATTTACTCAACAAGATCAACCATTACAATCTGATCAGGCTTTCGGGTGTTTGTTTCAGTCAAGGTCATTGGTATCTTGTTTACGAGTATGCCGTGAATGGATCTCTAACTGACTGGATCTATTACAGCAGAAGTGTCAAGAAGGTTTTGAGCTGGACACAGAGGGTACAAATTGCTTTGGATGTGGCAACAGGGCTTAACTATCTGCATAGCTATACCAACCCTCCCCATGTCCACAAGGATATAAAGAGCAGTAATGTTCTTCTTGACAATGATTTCAGGGCTAAAATTGCGAATTTCGGTTTAGCGACGTCTGCGGAAGGGCAGGAAGGAGAGTTCGCATTGACAAGGCACATAGTCGGGACAAAAGGTTACATGGCACCTGAGTATTTGGAGAATGGTTTGGTCTCCCCAAAGCTTGATGTTTATTCCTTTGGGGTTGTGATGCTGGAGATAATTACAGGGAAAGAGGCTGCTGTTGCATGTGGAGAGGGAGATGTGCTTTCATTGAAGACCTTAACTCTCATGCTTCACGATGAAAATCCCAAAGAAAAGCTTAAGGACTTCATAGATCCTTCTCTTCAAGGGAACTATCCTTCGGAACTTGCTCTATTGATGGCCAGATTGATCGAGAGCTGCATAACGAGGAATCCAGCCCATCGGCTAGGCATGGGTGAGGTTGTGCAGTCTCTGTCAAGAATCTTAACTACTTCACTGGATTGGGAATTGTCAAATAGTGTCTCTGTGTACAAAAGTTTTGGAAACAGCTCTTGA 1935 0.4264 MDLQSLISLCIFSLISSSFLVHAQQLYVRKATTDCENIDNSTSVLGYTCNGQNPSCQAYLIFRSQPPYNSVSSISDFMASDPSQLSQINSVSETATFETNKEVIVPVNCSCSGQYYQANSSYVVKHDNTYLLIANDTYQGLSTCQTLQDQNSHLPKNLYSGTRITVPLRCACPTKNQTDEGVKYLLSYTVNWGDFVSSISQKFGVDTGSTLEANELSDQDSVIYPFTTLLVPLQNSPSSSQTIAPPPPPSTPQTPPTPSDKKKKTWVYVIIGVVAGGAVLLVVSAIVFYVFFFRKSKRSQADPIIVSESYESNEKPIEKKVEEESEEFLESISEIANSLKVYKFEDLLSATENFSPNCWIKGSVYRGTFYGDFAAIKKMNGDVSKEINLLNKINHYNLIRLSGVCFSQGHWYLVYEYAVNGSLTDWIYYSRSVKKVLSWTQRVQIALDVATGLNYLHSYTNPPHVHKDIKSSNVLLDNDFRAKIANFGLATSAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSPKLDVYSFGVVMLEIITGKEAAVACGEGDVLSLKTLTLMLHDENPKEKLKDFIDPSLQGNYPSELALLMARLIESCITRNPAHRLGMGEVVQSLSRILTTSLDWELSNSVSVYKSFGNSS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01780 644 ProSiteProfiles Protein kinase domain profile. 268 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01780 644 ProSiteProfiles LysM domain profile. 186 231 IPR018392 -
Eupl03g01780 644 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Eupl03g01780 644 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 631 - -
Eupl03g01780 644 FunFam PTI1-like tyrosine-protein kinase 3 418 632 - -
Eupl03g01780 644 SMART LysM_2 187 232 IPR018392 -
Eupl03g01780 644 SMART LysM_2 121 167 IPR018392 -
Eupl03g01780 644 MobiDBLite consensus disorder prediction 241 256 - -
Eupl03g01780 644 SMART serkin_6 359 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01780 644 SUPERFAMILY Protein kinase-like (PK-like) 337 618 IPR011009 -
Eupl03g01780 644 CDD LysM 187 231 IPR018392 -
Eupl03g01780 644 Pfam LysM domain 188 232 IPR018392 -
Eupl03g01780 644 Pfam Protein kinase domain 377 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01780 644 Gene3D LysM domain 186 245 IPR036779 -
Eupl03g01780 644 Gene3D Transferase(Phosphotransferase) domain 1 419 635 - -
Eupl03g01780 644 MobiDBLite consensus disorder prediction 235 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01780 Eupl-Chr3 45816396 45818725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01780 9 632 Receptor kinase-like Gene Family AT2G23770 46.311 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl03g01780 Pkinase 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01780 - - nnu:104595785 817.764