Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01777 ATGAGAGTAGCAACAACACCGCCTCCACCTCTCTTCTCTCACACAAAGAATCACCACCATCCAATTTCAATCTCCTCCGAAGGGCCTAATTCTGCAAATTCTATGTCCCAAGCCTTCCATCAAGGGATATTCAGTTTCTCAAATGGGTTCGAAAGATCTACAACCACACACCAAGAAGAAAACCAGCACCAGCAGCACATCGCACAGCAGAGCCGGAGGGATAAGTTAAGAGTGCAAGGATTTGAGCCGCCACCGCCTTTGGTGGCGATAGAAGAGGAAGAATCAGTGTATGAAACGGGCGGGATGTTGTCAGAGATGTTCAATTTCCCACCCGGGGCAGCAACAGCCGCCGATCTCTTGGAGAATCAGATCCCGGCGAATTATCGACTAGCACGGCCACAACAAGCGACGGTAGGGAACGAGTGGTACGGTAACAGACATGGTCCGTTGAGAGATGGAAAGCAGCACAACAGCAGTAACCGTGACAGTGTAGCTCAGGCTCAAGCTCAGCATCATCAGATTTCAAGCATAAATGCGAACTCTGCAGCTGCCATGCAGCTTTTCCTGATGAACCCACAACCAAGATCACCTTCTCCTCCGGATCCCCCTACATCTTCTTCTACTCCTCTTCACTTGTTACTTCCTAACCATTCTACTCCTCCCCCTCCTCTCCAAGGATTTCACCCAGCCCAGTTCACATGGGTCCCCGGTAGCGGCGGAGGCGATAACACAACTAGTAAAATTGGAGGGGTTGTGGAGAGTCAAGGCCTTTCGTTGTCGCTGTCGTCTTCGTTGCAGCAATTGGAAGCAGCCAAGGCGGAGGAATTGAGGATGGGAGATGGTGGGGTGTTTTATTATGATCAAGGAGGCGGAGCGGCGTCTTCGGGGACTCATCAGCAAGCGTTGCATTTGCAAGGAGTGGGTCAGAACCAGCAGGTTCATTATGTTGGTTTTAGGTCATCTTCGGGGGTTGGGAATATTTTGAGGAATTCTAAGTATGTGAAGGCTGCCCAAGAATTGCTGGAAGAGTTTTGTAGTGTTGGGAGGGGACAATTCAAGAATAATAGGCTTGGGAAGCATAACACAAATCAGGGTAGTGGTGGTGCTGTTGCTGGTGGCTCTTCATCTTCCTCAAAGGATCTCCTTCCTTTGTCAGCTGCTGATAGGATTGAATATCAGAGAAGGAGGGCTAAGCTGTTATCCATGCTTGATGAGGTGGACCGAAGATATAGCCATTACTGCGAGCAAATGCAAATGGTGGTGAACTCGTTCGACACAGTGATGGGTTTCGGAGCCGCCAATCCTTATACAATTCTCGCACAGAAGGCCATGTCACGACATTTCCGATGCCTTAAAGATGCGATAGTGGCACAATTGAAGCAAACTTGTGAGCTTCTCGGGGAGAAAGAAGGCACGGGATCTGCCGGTGTCACGAAAGGAGAGACACCAAGGCTTCGGTTACTCGAGCAAAGCCTGAGACAGCAAAGGGCCTTCCATCAGATGGGGATGATGGAGCAAGAAGCTTGGAGGCCTCAGAGAGGCTTGCCCGAGCGTTCTGTCAACATTTTGAGATCTTGGCTCTTTGAGCATTTCCTTCACCCGTACCCAAGTGATGCAGATAAGCATTTGTTGGCGCGACAGACTGGTTTATCGAGAAATCAGGTCTCGAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCAATGGTGGAAGATATGTACCAACAAGAGAGCAAAGAAGACGAGGCAGAAGAGAGAGAAAGAGCAAGAAGCCAACATGGCCAAAGCAACAGCTCTGCACAAACACCAACGCCTCCAATGCCAGCAACAACAACACCTACAACAACAACAACAACAACAACTACAACAGCAGGCAAAAGATCCGATATCAATGCCCCCGACAACGACCCCTCATTCAACGCCATCAATAGACAATGCTTCTCGGAAAACCAAGCAAGCCCAGCCACACCCACAACCACTATTATGCCCACCGCCACCACCACACATGATGACATCTCACCACCCCTATCGCAACACTTTCCGGCCAAACATGAATCCAACATCCATCATCAGGTGGCCGCCGTCAATGACACTAGTAGTCGCCGCGGCGGTATCGGTGCTGCCGACTATAGGACCACCAGTGGGAATGCCAACATTGTAAGGTTTGGGACCACCACAGGTGATGTGTCACTCACACTAGGGCTTCGACACGCCGGAAACTTACCGGAAACAAGCCGATTTTCGATCAGAGACTTTGGAGGCTGTTGA 2271 0.5011 MRVATTPPPPLFSHTKNHHHPISISSEGPNSANSMSQAFHQGIFSFSNGFERSTTTHQEENQHQQHIAQQSRRDKLRVQGFEPPPPLVAIEEEESVYETGGMLSEMFNFPPGAATAADLLENQIPANYRLARPQQATVGNEWYGNRHGPLRDGKQHNSSNRDSVAQAQAQHHQISSINANSAAAMQLFLMNPQPRSPSPPDPPTSSSTPLHLLLPNHSTPPPPLQGFHPAQFTWVPGSGGGDNTTSKIGGVVESQGLSLSLSSSLQQLEAAKAEELRMGDGGVFYYDQGGGAASSGTHQQALHLQGVGQNQQVHYVGFRSSSGVGNILRNSKYVKAAQELLEEFCSVGRGQFKNNRLGKHNTNQGSGGAVAGGSSSSSKDLLPLSAADRIEYQRRRAKLLSMLDEVDRRYSHYCEQMQMVVNSFDTVMGFGAANPYTILAQKAMSRHFRCLKDAIVAQLKQTCELLGEKEGTGSAGVTKGETPRLRLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQESKEDEAEERERARSQHGQSNSSAQTPTPPMPATTTPTTTTTTTTTTAGKRSDINAPDNDPSFNAINRQCFSENQASPATPTTTIMPTATTTHDDISPPLSQHFPAKHESNIHHQVAAVNDTSSRRGGIGAADYRTTSGNANIVRFGTTTGDVSLTLGLRHAGNLPETSRFSIRDFGGC* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01777 756 MobiDBLite consensus disorder prediction 594 673 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 18 35 - -
Eupl03g01777 756 Gene3D - 512 574 - -
Eupl03g01777 756 FunFam BEL1-like homeodomain protein 4 512 574 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 356 378 - -
Eupl03g01777 756 SMART prehox3 322 457 IPR006563 -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 139 174 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 159 174 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 576 593 - -
Eupl03g01777 756 CDD homeodomain 509 570 IPR001356 GO:0003677
Eupl03g01777 756 ProSiteProfiles 'Homeobox' domain profile. 506 569 IPR001356 GO:0003677
Eupl03g01777 756 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 180 598 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 190 227 - -
Eupl03g01777 756 SMART HOX_1 509 573 IPR001356 GO:0003677
Eupl03g01777 756 Pfam Associated with HOX 327 456 IPR006563 -
Eupl03g01777 756 Pfam Homeobox KN domain 526 565 IPR008422 GO:0003677|GO:0006355
Eupl03g01777 756 SUPERFAMILY Homeodomain-like 511 576 IPR009057 -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 53 75 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 1 35 - -
Eupl03g01777 756 MobiDBLite consensus disorder prediction 576 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01777 Eupl-Chr3 45764625 45770125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01777 33 556 Homeobox Transcription Factor Family AT4G36870 48.731 6.09e-136 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Eupl03g01777 POX 7.1e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01777 - - nnu:104595789 944.11