Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01770 ATGGAAGTGCTGTCATGCTCGGATGTCCAGTATGTTGGAGAATCTAATTGTCCAGATCAGAGTTCTGAAACAAAGTTTCTGTATAGTGGAGAATCCAACTGCCTTGAACATGGAAAGCGAGTTCAAGTATCGGACATTACACGCACAGTGGATGACTTCGTGCTCAATGGAGAAGGGGCTCAGAAAGATAGACCCGGTGAGGATCAAGGGAGAGTAAATGGACCACCTACTTCAGAAGGCCTCTGCAGTGGAACTTCAGATCCTGAACATAAGGAGAAGGGGCAAGAGTTGCTTTGCGACTTCCATGGTTTTCAACAGGGTAGCCCGAATGCACAGAAGCAACACACTGAACCTTGCACGGCCTCTGGGAACATGTATCCAGTTGTGGATAAGATTGAAGGTGAGCTGCCAAGTAGCAACCGGGATGGAGAATCTCGTCTTCCGAAAGCTGAGTGGTCCGAGCAAGATGAAACTGTGGCATTGTGGGTAAAGTGGAGAGGAAAATGGCAGGCGGGCATCCGATGTGCAAGAGCTGACTGTCCACTATCAATTTTGAAAGCAAGGCCTACTCATGATCGGAAGAAGTATTTCGTGGTTTTTTTTCCCCAGAAAAGGAATCATTCTTGGGCAGATATGCAACTTGTCCGGCCAATTAATGAGTTCCCGGAGCCTATTGCATATAGAACACATTATAGAGGGGTAGAAATGGTGAAAGATTTGAGCATCCCACGCCGCTTTGTCATGCAAAAGCTTGCTGTTGCCATGCTGAATGTCAGTGACCAATTACACACTGAGGCTGTGATTGAGAGTGCTCGCAAGGTGGCGGCATGGAAGGAATTTGCAATGGATGTTTCTCGTTGCAAAGGTTATTCCGATCTTGGAAGGATGCTTCTGAAGCTTCAGAGTATGATATTGCAGCGCTACATAGATCCTGGTTGGCTACGACATTCATTTGGCTCTTGGGCACAACGCTGCCAGAATGCACAAAGTGCTGAATCCGTTGAAACACTAAAAGAGGAATTAGAAGATTCCATTCTGTGGAATGAAGTCGAAGCACTCTGGGATGCACCTGTCCAGCCTGAATTGGGCTTTGAGTGGAGGTCTTGGAAGCAGGAAGTTGTGAAATGGTTCTCGACATCACAGCCTATGCCTAGTGGTGGAGATGTAGGGCAGAGAAACAGTGATGATTCCATGACTTTGGGTCTCCAAATCAGCAGGAAACGGCCTAAGCTTGAAGTTCGTCGTGCAGAGATGCATTCTTCACAAGTGGAAGCCACGGCTTCGCATGAGGTCAACCCTCAAACTAACACTGTTGACATCAACTCTGGATATTTTAATAGTCAGGGCCTTGGAAATGCTAGTACATTGGTTCCTGAGCCTTGTAAAGACAGAGGTTCTACCATTGGAGCTGCACCATCTGAGTACCCTGGTAGTGTGGCTGACAGATGGGACGAAATTGTAGTTGAAGCCGGAAATCCCGAGTTCATTCGAACCACAGAAGTGGAAGATATACCTGTGGATGGAGGGAGTGGGGGGAAGTCTTGGGATCCTGGGAATAAGTACCGCCAGTGCCTGGCTTTTATTGAAACTAAGGGAAGGCAATGTGTGCGGTGGGCAAATGATGGTGGTGTTTACTGTTGTGTGCATTTGGCCACTCAATCTCTTGGGAAAATTTCGAAGGCAGGGCAATCTCCTGTTGATGCTCCAATGTGTGAAGGAACCACGAATCATGGTACAAAATGTAAGCATAAGTCTCTATATGGCTCCTCATTTTGCAAGAAACACAGACTTCATAATAGCCAGTGTTTGATGGATGTGGAAAACCCATCAACTTCATCAGGTAATAAGCTTAAGAGAAAGCACATGGAGATGATTTCTACTTCAGAAACTGCATATTGCAAAGAAATAATTTCCTTGGGAGAAGTTAAAAATCCCATCCAAAAGAACTCTGTCTCCATTATACAGGGAGACACCGTGGATGGAAATAGCTTAATAAAAAAATCTGAACATTGCATTAAAAGCTATAATAGTGCAGAGTTGCTGTGCTGCATAGGATCGTGCCACCGGAATAATAATGCTCCATGTCTAGATCGTGCAAAACTGCACTCGTTGTATTGTGAAAAACACCTTCCAAGCTGGCTCAAACGTGCAAGGAATGGTAAGAGTAGGATAATATCAAAAGAAGTCTTTACTGATCTTTTAAGGAATTGCAGCTCACAGAAGCAAAAGTTGCATTTACATCTAGCATGCGAGCTTCTTTACGGGTTCATTAAAAGTATCCTATACCGCCGAAACCCAGTTCCCAGGGAAACACAACTCCAGTGGATCTTATCCGAATCTTCTAAAGATATATGTGTTGGGGAATGCCTAATGAAGTTGGTTTCCCGCGAAAGAGAGAAACTCAGGGGGCTTTGGGACTTTGATATTGACAAATATAAGCTAGTTTCCTCCTCTGGCGCAGAAGAAAAAGTGTGTATGCCAGCGATCCTCGAGAACAGCCATAGCATTCAGAAGACTGTTAAATGCAAGATTTGTACAGAGGAGTTCTCTGATGACCAAGTGCTCGGTGTGCACTGGATGGACATTCACAAAAAGGAAGCGCAATGGCTGTTCAGAGGGTATGTGTGTGCGATCTGCACGAATTCATTTACTAACAAGAAAGTTCTCGAGACCCACGTGAGGAAGAGACACGGGGTGCAATTCCTCGAACAGTGCATACTGTTCCAATGTATACCTTGTGGCAACCATTTCATGAACCCTGAACAGTTATGGTTGCATGTCCTTTCGGTTCATTGCATGGATTTCAGGATGCCAACTGTTGCTCAGCAAGATAACCTGTCTGCAAGCCAAGCTTCTCGACCGAAGCTTGTGCTAGGTAATAACGATGCATCAGGGAACAATTCCGATAGTAAAGGTGGGTTGCGGAGGTTCATTTGTCGGTTCTGCGGGTTGAAGTTTGATCTCTTACCGGATCTTGGGCGTCATCATCAGGCTGCTCATATGGATCCGAATTCAATCAGCCATTTTTCCCAAAAGAGAGGAACATGTCTTAATCCTTATAAATTGAAATCAGGTAGACTAAGCCGTCCTAGATTTAAGAGCAGTCTTGGAGCGGCATCGTATAGGATAAGGAACAGGAATACTTTAAGAATGAAGAAACGCTTTCAGGCATCAAGTTCGGTTAGGACTGAGGGAGCCAGTGTGCAGACTCAGGTGACTGAGGTGGTGGGTCTTGGTAGATTGATAGAATCCCAACGCTCAGCTGTTGCTAATATCTTGTTTTCTGAGATTCAGAAAACAAAACCCCGGCCAAATAACCTTGACATTCTTTCTGTTGCTCGCTCCACTTGCTGCAAGATAAGCCTCCAAGATACACTGGAAAAGCACTATGGAGTGTTGCCGGAACGTCTGTATCTGAAGGCAGCCAAACTGTGCAGTGAGCTAAATATTCAGGTGGAGTGGCACCAAGAAGAGTTTATATGTCCTAAAGGATGTAAACCTGTCAAAGATCCCCTATTTTTGTCTCCCTTGATGCCTCTCCCAAGTGGTTTTATAGAACCCACACCGGCAAAGTCAGCAGATCCTACAAAAAGTGAGGAGTGGGAAATGGATGAATGCCACTATATACTTGAATCACAGCATATCAAATCAAAACCCATGCGAAAGGCCATAGTATTGTGTGAAGATGTAAGCTTTGGACGGGAATCAGTTGGCATAGCCTGTGTAGTTGATGAGGATCATATAGGTTCCCTCCTAATTATTAGAGATGAAGGATCCGATGTCCCAAAAACTAGCTGCCCCCCCATGCCTTGGGAGGGATTTAGCTATGTTACAGAGCGGTTGCTTGATCGATCCCTTGGTCTTGATACAAAGAGTTCACAGTTGGGGTGCGCTTGCCCGCATTCGACATGTTATCCTGAGACATGTGATCATGTCTACCTCTTTGACAACGACTATGAAGATGCCATGGATATTTATGGTAAACCAACACATGGTAGATTTCCATATGATGAAAAAGGCCGAATCATCTTGGAGGAGGGTTACCAAGTTTATGAATGCAACTCCATGTGCAGCTGTGACAGAACTTGTCGGAATAGGGTTTTACAGAATGGGGTGCAAGTCAAATTGGAAATCTTCAAAACAGAGAACAAGGTGACAGTTTCCAAATTTTTCATGGTGTTCAGGAATCTTAGATTAAATTTTCTGCTTCTCGGTTCACAGGGTTGGGCAGTCAGGGCTGGTGAAGCAATCTCGCGAGGGACATTTGTGTGTGAGTACATTGGGGAGGTTTTAAATGACCAGGAGGCGAACAAGAGGGGAGAGAGGTATGACAATGAAGGTTGCAGCTATTTGTATGACATTGATGCTCATATGGACGATATGAGCCGATTAACTGAAGGTGCGGTCCCATATGTGATTGATGCCAGGAGATATGGGAATGTTTCACGGTTCATCAATCATAGATCAATATTGGCGAAGAGCTGGCATACGACTACCGTTACAAGCTACTACCTGGAGGAGGGTACCCTTGTCATTGTGACGCTCCCAATTGCCGGGGCCGTCTATGCTAAATACTTGGTGAACTTGAAATTAAAGTTCCCGCAGCTTCACCCAAAAGCAGAAGTCATCCCCATTCGCGGATGGAGCATACGATGCTTGATGAAATTGTGA 4671 0.4513 MEVLSCSDVQYVGESNCPDQSSETKFLYSGESNCLEHGKRVQVSDITRTVDDFVLNGEGAQKDRPGEDQGRVNGPPTSEGLCSGTSDPEHKEKGQELLCDFHGFQQGSPNAQKQHTEPCTASGNMYPVVDKIEGELPSSNRDGESRLPKAEWSEQDETVALWVKWRGKWQAGIRCARADCPLSILKARPTHDRKKYFVVFFPQKRNHSWADMQLVRPINEFPEPIAYRTHYRGVEMVKDLSIPRRFVMQKLAVAMLNVSDQLHTEAVIESARKVAAWKEFAMDVSRCKGYSDLGRMLLKLQSMILQRYIDPGWLRHSFGSWAQRCQNAQSAESVETLKEELEDSILWNEVEALWDAPVQPELGFEWRSWKQEVVKWFSTSQPMPSGGDVGQRNSDDSMTLGLQISRKRPKLEVRRAEMHSSQVEATASHEVNPQTNTVDINSGYFNSQGLGNASTLVPEPCKDRGSTIGAAPSEYPGSVADRWDEIVVEAGNPEFIRTTEVEDIPVDGGSGGKSWDPGNKYRQCLAFIETKGRQCVRWANDGGVYCCVHLATQSLGKISKAGQSPVDAPMCEGTTNHGTKCKHKSLYGSSFCKKHRLHNSQCLMDVENPSTSSGNKLKRKHMEMISTSETAYCKEIISLGEVKNPIQKNSVSIIQGDTVDGNSLIKKSEHCIKSYNSAELLCCIGSCHRNNNAPCLDRAKLHSLYCEKHLPSWLKRARNGKSRIISKEVFTDLLRNCSSQKQKLHLHLACELLYGFIKSILYRRNPVPRETQLQWILSESSKDICVGECLMKLVSREREKLRGLWDFDIDKYKLVSSSGAEEKVCMPAILENSHSIQKTVKCKICTEEFSDDQVLGVHWMDIHKKEAQWLFRGYVCAICTNSFTNKKVLETHVRKRHGVQFLEQCILFQCIPCGNHFMNPEQLWLHVLSVHCMDFRMPTVAQQDNLSASQASRPKLVLGNNDASGNNSDSKGGLRRFICRFCGLKFDLLPDLGRHHQAAHMDPNSISHFSQKRGTCLNPYKLKSGRLSRPRFKSSLGAASYRIRNRNTLRMKKRFQASSSVRTEGASVQTQVTEVVGLGRLIESQRSAVANILFSEIQKTKPRPNNLDILSVARSTCCKISLQDTLEKHYGVLPERLYLKAAKLCSELNIQVEWHQEEFICPKGCKPVKDPLFLSPLMPLPSGFIEPTPAKSADPTKSEEWEMDECHYILESQHIKSKPMRKAIVLCEDVSFGRESVGIACVVDEDHIGSLLIIRDEGSDVPKTSCPPMPWEGFSYVTERLLDRSLGLDTKSSQLGCACPHSTCYPETCDHVYLFDNDYEDAMDIYGKPTHGRFPYDEKGRIILEEGYQVYECNSMCSCDRTCRNRVLQNGVQVKLEIFKTENKVTVSKFFMVFRNLRLNFLLLGSQGWAVRAGEAISRGTFVCEYIGEVLNDQEANKRGERYDNEGCSYLYDIDAHMDDMSRLTEGAVPYVIDARRYGNVSRFINHRSILAKSWHTTTVTSYYLEEGTLVIVTLPIAGAVYAKYLVNLKLKFPQLHPKAEVIPIRGWSIRCLMKL* 1557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01770 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 842 863 IPR013087 -
Eupl03g01770 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 910 931 IPR013087 -
Eupl03g01770 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 876 897 IPR013087 -
Eupl03g01770 1556 Gene3D SET domain 1207 1504 IPR046341 -
Eupl03g01770 1556 SUPERFAMILY SET domain 1215 1487 IPR046341 -
Eupl03g01770 1556 SMART c2h2final6 908 931 IPR013087 -
Eupl03g01770 1556 SMART c2h2final6 874 897 IPR013087 -
Eupl03g01770 1556 SMART c2h2final6 840 863 IPR013087 -
Eupl03g01770 1556 SMART c2h2final6 977 1000 IPR013087 -
Eupl03g01770 1556 MobiDBLite consensus disorder prediction 56 91 - -
Eupl03g01770 1556 Pfam Zinc finger C2H2-type, 3 repeats 876 1001 IPR040689 -
Eupl03g01770 1556 Gene3D Classic Zinc Finger 833 904 - -
Eupl03g01770 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 908 931 IPR013087 -
Eupl03g01770 1556 SMART preset_2 1227 1358 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl03g01770 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 840 868 IPR013087 -
Eupl03g01770 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 977 1005 IPR013087 -
Eupl03g01770 1556 Pfam Pre-SET motif 1233 1366 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl03g01770 1556 ProSiteProfiles SET domain profile. 1374 1556 IPR001214 GO:0005515
Eupl03g01770 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 979 1000 IPR013087 -
Eupl03g01770 1556 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1384 - -
Eupl03g01770 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 874 897 IPR013087 -
Eupl03g01770 1556 ProSiteProfiles Pre-SET domain profile. 1295 1371 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl03g01770 1556 Pfam SET domain 1408 1488 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01770 Eupl-Chr3 45662230 45683957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01770 110 1487 C2H2 Transcription Factor Family AT2G23740 47.557 0.0 1238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl03g01770 Pre-SET 3.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01770 - - nnu:104587396 1999.56