Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01744 ATGATTATAGACCACCGTAATCTCGTTCTTCTCTTCGCGATTGCCTTTCTCAACTTTATCACCGCTCAAGCCTCGACTCACTGCAATCGATCCTGCGGCAGCGCCACACAGAATCACCTCCCTTTCCCGTTCGGATTTTCCGACGACTGTGAAATCCGTCTGAACTGCAGCGAGAACGGCGACATCCTCATCGACGAATTTCAAGTCCGGAACGTGACCTCAGACAGTCTTTTAGTCAACCTGCCGGCGAAATGCAACCGTCCGATCCAAAAGCTGATGCGGCTTTTCGACCGGAACTACGCGTTGACGTGGCAAAACGACCTATTATTAGGGAACTGCAGCTTGCCTGATGACGGATGCAAGTTACAAACGACTCAGGTGGGGAGTCCGGAGACTCATTTCGAGTTGCAGGGGTGCCATTCCAAGGTCGACAATATAAGCTGCTTTTCGAATGCGGACAAACAAGCAAATGGTTCCAGTTTCATGACTTTTACTAAAGTGAATCAGAACCGTTGTAATCTCTTGTTGTCGTCGATCGCCGTTGATGTTGCGAATAACCGTCTGCTCGAGTTTCAGACGGTTCAGTTGGGGTGGTGGTTAGAAGGGCCGTGCGCTGATAACTGTTCTTCGAATGCGGATTGTACGCCTGTCCAGTTGCCGTTGAAAGGACTGTCAGGATTTCGGTGTCGATGCAAAGACGGTTACGAAGGAGATGGGTTCAAGGCCGGCCGGGGTTGCCGGAAAGGTTCCAAGTGCAATCCTTCAAAATACATGTCCGGTCGATGTGGAGGAACTATTAGAGTGGGTGTTCTAATTGGAGGCATCATTGCTGGAGCTACTTTAATGGCTGGTCTGGCTCTTCTCTGCTATTTCATCCAACGGTGGTCCAGTTCTTTGAAATCCCGGAAGAACACCAAATGGCTACTATCGGAAACTGCGGGCAGCTGCAGCATCCCGTTTTATAGCTACAAAGAAATTGAGAGATCCACGAGCGGCTTCTCGGAGAAACATAGACTAGGAACTGGGGCCTATGGGACTGTATACGCAGGAAAACTTCACAATGACGAGTGGGTTGCCATAAAAAAGATCAGACATCGAGACGCTGACGGCATTGAGCAAGTCATGAATGAGATCAAGCTCCTCTCATCCGTGAGTCACCCTCGTCTAGTCCGCCTCTTAGGCTGCTGTTTAGAGAGGGGAGAACAGATCCTTGTCTATGAATTCATGCCCAATGGAACTCTTTCTCAGCATCTACAGAGGGAGAGGGGCACTGGTCTCCCTTGGACAATTCGCTTAACCATCGCTTCTGAAACCGCTCAAGCCATTGCTCATCTCCACTCTTCCATGAACCCGCCAATATACCACAGAGACATCAAGTCCACCAACATACTCTTAGACCATAACTTCAATTCCAAAGTTGCGGATTTTGGTCTTTCTAGACTTGGTATGACTGAGCTGTCCTATATCTCGACAGCTCCACAAGGTACACCAGGGTATCTTGATCCTGAATACCATCAGAACTTCCATCTTTCCGATAAAAGCGATGTTTACAGCTTTGGGGTGGTTCTCGTGGAGATCATAACTGCATTGAAGGTGGTGGACTTCTCTCGGCCCCACAGCGAGGTGAATTTGGCTGCACTTGCCGTAGACAAGATTGGGAAGGGGTGTGTGGATGAGATAATGGATCCATTCCTCGAGCCCCATAGGGATGCTTGGACCCTTTCATCTGTGCACAAGGTGGCCGAGCTGGCATTTAGATGCCTTGCCTTTCACAGGGACATGAGGCCTTCAATGATGGAAGTGGCGGCTGAACTAGAAAACATAAGGCTCAGTGGGTGGGCCTCTATGGAGGAGAACATTTGCCTGGGATCGTCAGTAGCGTCCTCTTGCTCGTCTCCATCTAATGGATGTGAACAGTCCCAAGGGTTGACAGTTAAAAAGTTGGGGCTGGAGAGTTGGAGATTGATTGTGCCACAGAGAAGTAATTGTGCAGTATCGATGGAGGAGGTGAAGGATAGTTCCCCCGTTTCTGTGCAGGACCCATGGTTCAGTGAACAGAGCTCACCTTCAACAAACAGCTTGTTGGGCAATGTAATCAACTGA 2103 0.4936 MIIDHRNLVLLFAIAFLNFITAQASTHCNRSCGSATQNHLPFPFGFSDDCEIRLNCSENGDILIDEFQVRNVTSDSLLVNLPAKCNRPIQKLMRLFDRNYALTWQNDLLLGNCSLPDDGCKLQTTQVGSPETHFELQGCHSKVDNISCFSNADKQANGSSFMTFTKVNQNRCNLLLSSIAVDVANNRLLEFQTVQLGWWLEGPCADNCSSNADCTPVQLPLKGLSGFRCRCKDGYEGDGFKAGRGCRKGSKCNPSKYMSGRCGGTIRVGVLIGGIIAGATLMAGLALLCYFIQRWSSSLKSRKNTKWLLSETAGSCSIPFYSYKEIERSTSGFSEKHRLGTGAYGTVYAGKLHNDEWVAIKKIRHRDADGIEQVMNEIKLLSSVSHPRLVRLLGCCLERGEQILVYEFMPNGTLSQHLQRERGTGLPWTIRLTIASETAQAIAHLHSSMNPPIYHRDIKSTNILLDHNFNSKVADFGLSRLGMTELSYISTAPQGTPGYLDPEYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPHSEVNLAALAVDKIGKGCVDEIMDPFLEPHRDAWTLSSVHKVAELAFRCLAFHRDMRPSMMEVAAELENIRLSGWASMEENICLGSSVASSCSSPSNGCEQSQGLTVKKLGLESWRLIVPQRSNCAVSMEEVKDSSPVSVQDPWFSEQSSPSTNSLLGNVIN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01744 700 SUPERFAMILY Protein kinase-like (PK-like) 312 605 IPR011009 -
Eupl03g01744 700 Gene3D Phosphorylase Kinase; domain 1 319 408 - -
Eupl03g01744 700 Pfam Protein tyrosine and serine/threonine kinase 336 604 IPR001245 GO:0004672|GO:0006468
Eupl03g01744 700 ProSiteProfiles EGF-like domain profile. 200 241 IPR000742 -
Eupl03g01744 700 ProSiteProfiles Protein kinase domain profile. 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01744 700 FunFam Wall-associated receptor kinase-like 20 409 618 - -
Eupl03g01744 700 SMART serkin_6 333 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01744 700 Gene3D Laminin 205 241 - -
Eupl03g01744 700 MobiDBLite consensus disorder prediction 677 700 - -
Eupl03g01744 700 Gene3D Transferase(Phosphotransferase) domain 1 409 620 - -
Eupl03g01744 700 MobiDBLite consensus disorder prediction 676 700 - -
Eupl03g01744 700 FunFam Wall-associated receptor kinase-like 14 300 408 - -
Eupl03g01744 700 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 686 IPR044652 GO:0004672
Eupl03g01744 700 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Eupl03g01744 700 SMART egf_5 203 247 IPR000742 -
Eupl03g01744 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01744 Eupl-Chr3 45376378 45383272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01744 1 698 Receptor kinase-like Gene Family AT2G23450 55.618 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Eupl03g01744 PK_Tyr_Ser-Thr 6.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01744 - - nnu:104595824 957.592