Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01739 ATGGAGCTTTCCGAGATTCGCCGGAGATTGTGGGAACGGCCACCGGGAAGGTCTCCAGACCGCATATGTGAGATCTCAGAGTCTTGCTCCCAGATGGCGCTTCAGTTTCACGACCAGAACGAGGTTGGCGTGAGGATAAAGATGGTGTCGGGTTCGCCTGCGGGTGCGGTGGCTGCCGAATCAAAGAGAATTGGAGCCAACTGGGTCGTATTGGACAAACAATTGAAGCAGGAGGAGAAGCGTTGCATGGAGGAACTTCACTGCAACATTGTGGTGATGAAACGTTCCCAACCCAAAGTTCTTAGGCTCAACTTGGGAGGCCCATCCGAACTCCAACCTCCCTTGTCTTCTTCTTCAACATTCGATTCCGACGAGGAAGAGTCGCATGACTACAATATCAAGCATTCCACTCCTGTTAGCAGCCCCGAATATCAGGAAACTTCCTTGACCAGGACAACCACCGAAGAAGCTTCCGTATCAAGTACTGACTCGGCAACTACTCCTTTCTTTCTCTGTGAACAAAACCCACTTTTTGAAGGACACAACAAGGTGAAGTCCAGATCCAGAGCAATATATGAACGAGTTGACTCGGAGAGTGAAGAACCGAGTCATATCTCTTCAAACGTTACTCGAAACAATGGGAATGTGTATTGGATTCCTCAAAACCACGCTGTTGATCAACAGTTATCAATTATCAGAAACTACAATAACACTCGCAACGTCAAAGGTCCCACTTCTAGAACCCTGCTCGAAAAGTTTGTCCAATTGGATCGAGAATCGAGGATCCGACGACTCGGGTTCGAGCAAATCCCTCGAATAGACCACGTTTTCAACTCGGATGTAAGAGATGTAGTCTCTTTAACCAGAACTTCTTCAGCTCCTCCTCCTCTATGTTCATTGTGCCAGCACAAGGCACCGGTTTTTGGAAAACCACCAAGATGGTTCGATTACAGAGAGCTTGAGAACGCTACAGATGGTTTTTCGAAGGTGAATTTCCTGGCAGAAGGTGGGTTTGGATCGGTTCATCGAGGAGTGTTGAGAGATGGTCAGGTGGTGGCTGTGAAGCAATTGAAGGTAGCTGGGTCTCAAGGAGATGCCGAGTTCAGTAGGGAGGTTGGGGTGTTGAGCTGCGCACAGCACAGGAATGTTGTGATGCTCATTGGTTTTTGTATAGAAGGCCGAAAGAGAGTCTTAGTTTATGAGTTTGTCTGCAACGGCTCTTTGGATTTCCACTTATATGGACACAAGAGAGACCCATTAGATTGGAGCTCGAGGCTTAAGATTGCAATTGGGGCAGCGAGAGGTTTACGATATCTTCACGAAGATTGCAGGGTGGGGTGCATTGTACACAGAGACATGCGGCCTAACAACATCCTCCTCACCCACGATTTTGAGCCCCTGGTTGGAGATTTTGGCCTCGCAAGGTGGCAAGAGGAATTGGATCTTGGTGCAGAGCAGCGCATCATTGGAACTTTAGGGTATCTTGCACCAGAGTACACAGAGGGCGCAAAGATTACAGAGAAAGCTGATGTATACGCGTTTGGGGTGGTGTTAATAGAGCTAATTACTGGCAGAAAAACAATTGATATGGCTCATTCCAAAGGGCAGCAGTTCCTAGCCAAATGGTCCCACCTTCTGTTGGCACCAGAAGAAGAAAATCAGGCCCTAGCAATTCACCATCAATTGCTGGATCCGCGATTGGACTTGAACCAACTCCACGAATTCTCACATCATCTAAGTGCCATGGCTCATGCTGCTTCATTGTGCCTACGTCGAGACCCAGAATCCAGACCCTCTATGTCAAAGGTCCTCAGAATACTAGAAGGAGGAGATGCAATCATTCCCCTTGGTCTTGACTCAGACTCAGTTGGTAGCAGAAGTGGGCGCTTGCGTGGCCTGAGCTCACACACAGGATCTGAATTAAGGGGATGCCATTCTCGTAGGCTTTCTCATTAA 1956 0.4821 MELSEIRRRLWERPPGRSPDRICEISESCSQMALQFHDQNEVGVRIKMVSGSPAGAVAAESKRIGANWVVLDKQLKQEEKRCMEELHCNIVVMKRSQPKVLRLNLGGPSELQPPLSSSSTFDSDEEESHDYNIKHSTPVSSPEYQETSLTRTTTEEASVSSTDSATTPFFLCEQNPLFEGHNKVKSRSRAIYERVDSESEEPSHISSNVTRNNGNVYWIPQNHAVDQQLSIIRNYNNTRNVKGPTSRTLLEKFVQLDRESRIRRLGFEQIPRIDHVFNSDVRDVVSLTRTSSAPPPLCSLCQHKAPVFGKPPRWFDYRELENATDGFSKVNFLAEGGFGSVHRGVLRDGQVVAVKQLKVAGSQGDAEFSREVGVLSCAQHRNVVMLIGFCIEGRKRVLVYEFVCNGSLDFHLYGHKRDPLDWSSRLKIAIGAARGLRYLHEDCRVGCIVHRDMRPNNILLTHDFEPLVGDFGLARWQEELDLGAEQRIIGTLGYLAPEYTEGAKITEKADVYAFGVVLIELITGRKTIDMAHSKGQQFLAKWSHLLLAPEEENQALAIHHQLLDPRLDLNQLHEFSHHLSAMAHAASLCLRRDPESRPSMSKVLRILEGGDAIIPLGLDSDSVGSRSGRLRGLSSHTGSELRGCHSRRLSH* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01739 651 SUPERFAMILY Protein kinase-like (PK-like) 307 607 IPR011009 -
Eupl03g01739 651 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 403 616 - -
Eupl03g01739 651 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 299 402 - -
Eupl03g01739 651 ProSiteProfiles Protein kinase domain profile. 327 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01739 651 ProSitePatterns Tyrosine protein kinases specific active-site signature. 448 460 IPR008266 GO:0004672|GO:0006468
Eupl03g01739 651 Gene3D Transferase(Phosphotransferase) domain 1 403 612 - -
Eupl03g01739 651 PANTHER OS01G0750732 PROTEIN 113 610 - -
Eupl03g01739 651 MobiDBLite consensus disorder prediction 103 164 - -
Eupl03g01739 651 Gene3D Phosphorylase Kinase; domain 1 298 402 - -
Eupl03g01739 651 MobiDBLite consensus disorder prediction 134 164 - -
Eupl03g01739 651 Pfam Protein tyrosine and serine/threonine kinase 331 606 IPR001245 GO:0004672|GO:0006468
Eupl03g01739 651 MobiDBLite consensus disorder prediction 625 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01739 Eupl-Chr3 45307393 45312601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01739 283 608 Trihelix Transcription Factor Family AT5G38560 45.075 1.58e-90 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Eupl03g01739 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01739 - - psom:113294544 842.417