LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl03g01734	CTAATTGCTATATCATCACCACCACAAAACAAAGTCCTCTTTAAAATAGAGAGAGAACGGAAAAAATGGGCAAGAATCGTTTCTAGAATTTGTCTGGCCTTGAGAGAGCTTCATCTTCATGGCGCGACACTAAAATATTTATCAAACTTAGCTATGGATACACTGATCATCCAATTTCAAGCAATTGTAGTTACTGCCCTTTTCGCCTTCATCTCTCTCTATCTATTATGGGGATTTAAGACAAAAAATAATAAGAGCCGAGGTAGGAAGGCAGTGGAACCCGCTGGTGCATGGCCGGTTATTGGTCACCTCCATCTGTTAGGGGGGCGTGAGCTGCTTCATCGAACTCTTGGAGCCATGGCCGACAAGTGCGGACCAGTCTTCATGATTCGGCTCGGCATGCGACGTGCACTCGTGGTGAGTAGCTGGGATGCGGCAAAGGAATGTTTCACTACCAATGATAAGATCCTCGCCACTCGTCCAAGTCTGGTGGCTGTAAAGTACATGGGCTACAACAACGCTGTGTTAGGCTTCGCACCGTATGGGCCATACTGGCGTGAAGTGCGCAAGATAGCTACGCTGGAGCTTCTCTCGAACCACCGGCTCGAGATGCTCAAGCACATCAGGACCTCAGAGATAGAGATGTCCATGAAAGAACTGTACGAGCTGTGGGTGAAGAATGGTAGTCGACATCCAGTTTCAGTGGAGATGAATCAATGGTTCAGAGACTTGGCACTCAACGTGATGGTCAGGATGATCACCGGTAAACGACACTTTGGCTCCAGTACTGCGGGTGAAGATGACGAGACGCGGCAGTTCCAAAAAGCCATGGATGATTTACTCTATATGTTTGGGGTATTTGTGGTGTCGGATGCGCTTCCTTTCCTAGGGTGGTTAGATGTGCAGGGATACGAGCGTGCCATGAAGAGGACCGGTAAGGAAATGGATCGTGTGCTCACCAGCTGGGTGGAGGAGCATAGCCTTAAGAGGGTCTCACGAGGCGCTGATAATAACGGAGAGCAAGACTTCATCGACGTGATGCTGTCGATCCTGAATGATGATCAGCTCTGTGGTTATGACGCCGATACCGTTGTTAAGTCTACTTGCCTGGCTCTAGTAGTAGCTGGCAGCGACACCACAGTGACCACTTTAACATGGGCCCTCTCCTTACTTTTGAACAATCGACATGTGTTAAAAAAGGCACAAGCTGAGTTGGATATCCACGTAGGCAATGACAGACACGTAGACGAATCAGACATCAAGAACTTGGTATACCTCCAAGCTGTTGTCAAGGAAACATTGCGCTTATACCCTCCTGCACCACTTTCGTTACCACACGAGGCCCTAGAGGACTGCACCATAGCTGGCTTCAACGTCCCAGCAGGCACACGCATAATAACCAACATTTGGAAGCTACACAGAGATCCACGTGTGTGGTCGGATCCTTCAAAGTTCATGCCAGAGAGATTTCTAACTAGCCATGCGGACGTCGATGTTAGGGGTCAGCATTTTGAACTCATCCCTTTTGGATCAGGGAGACGGATGTGCCCAGGAATCTCATTGGCTCTCAATGTCCTGCACTTAACGCTTGCTCGTCTGCTACATGGATTCGAGATGGGGACTCCGTCAAACGCACCAGTGGATATGACTGAAAGTGGGGGGCTTGAAATCCACAAAGTAACCCCACTGGATGTACTCTTTGCCCCACGCCTTCCATCCACTGTTATTGGATATTAA	1737	0.4876	LIAISSPPQNKVLFKIERERKKWARIVSRICLALRELHLHGATLKYLSNLAMDTLIIQFQAIVVTALFAFISLYLLWGFKTKNNKSRGRKAVEPAGAWPVIGHLHLLGGRELLHRTLGAMADKCGPVFMIRLGMRRALVVSSWDAAKECFTTNDKILATRPSLVAVKYMGYNNAVLGFAPYGPYWREVRKIATLELLSNHRLEMLKHIRTSEIEMSMKELYELWVKNGSRHPVSVEMNQWFRDLALNVMVRMITGKRHFGSSTAGEDDETRQFQKAMDDLLYMFGVFVVSDALPFLGWLDVQGYERAMKRTGKEMDRVLTSWVEEHSLKRVSRGADNNGEQDFIDVMLSILNDDQLCGYDADTVVKSTCLALVVAGSDTTVTTLTWALSLLLNNRHVLKKAQAELDIHVGNDRHVDESDIKNLVYLQAVVKETLRLYPPAPLSLPHEALEDCTIAGFNVPAGTRIITNIWKLHRDPRVWSDPSKFMPERFLTSHADVDVRGQHFELIPFGSGRRMCPGISLALNVLHLTLARLLHGFEMGTPSNAPVDMTESGGLEIHKVTPLDVLFAPRLPSTVIGY*	579

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl03g01734	578	Gene3D	Cytochrome P450	78	564	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g01734	578	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	509	518	IPR017972	GO:0005506\|GO:0016705
	Eupl03g01734	578	CDD	CYP82	125	570	-	-
	Eupl03g01734	578	FunFam	Cytochrome P450 82C4	81	568	-	-
	Eupl03g01734	578	SUPERFAMILY	Cytochrome P450	97	570	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g01734	578	Pfam	Cytochrome P450	96	552	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g01734	578	PANTHER	CYTOCHROME P450 82C3-RELATED	68	574	-	-
	Eupl03g01734	578	PRINTS	P450 superfamily signature	507	516	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g01734	578	PRINTS	P450 superfamily signature	375	392	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g01734	578	PRINTS	P450 superfamily signature	428	439	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl03g01734	Eupl-Chr3	45233792	45239457	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl03g01734	52	571	Cytochrome P450	AT4G31940	56.167	0.0	605

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl03g01734	K23136		-	jre:109010345	683.715

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