Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01729 ATGTATTTAAGCTCGAACTCGATGAGAACTGCATCGTCTTTTCCCGATCTCTCTTTACAGATCAGTCCACCGTCGATTTCGGACTGTGGAGGTAAGGAAGTGGGCTATGATGGATCGATGAGGAGATTGTTTTACGGCGATAGGAGTTCGACAACTGATTCTGGCAGTAGTGGGAGCGATATAAGTCATGAACAAGGGTTCTTGCACTTAGAGAGGGCTTATGATCTTCGTGGGGGTGAACCCACGTTGAGTCTAGGATTCGAGAGGGCAACCTTGGATCTTCCACCTGTACAACTACCACGCAACCTTCACCATCTCCATCAACCTCAAATATATGGTCGTGAGTTTAAGAGAAATGCGAGAATGGTTAGTGGGGGAAAGAGAAGCATCAGAGCTCCTAGAATGAGATGGACTACAACTCTCCACGCCCATTTTGTTCACGCTGTGGAGCTCCTCGGTGGTCATGAGAGAGCAACACCCAAATCAGTTTTGGAGTTAATGAATGTGAAGGATCTAACACTAGCTCATGTGAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGAGCAGGCCAAGGGCAGACAGATATGGGTTTGAATAAAAAAACAGGGATTGTTGAAGTGGAGATTGGATCATCTTGTGAGAAAGCTGATGATATCAACGCTGCTTATTCTCTCAACCCATCACCTCCTCCTCCACCACCACCACCACCACCACAACCACCACTACCAAAATCTCCTAGACTTGAATGCAGAGGATCATTGTCATCCATGGAGAGGAATTCTTGGAGCCCATCATCTCAGGACAATGAAACTACTCATTCCCATTTCAAATCCAACCATTTTATAATTAAAAGAACCGAGGTGGACGGATATGGGAGAGGCCTCCACGTGTCACAGTGTGAGAACGAGAAGTTGTATTTGAGCACTTTGGCATCTTCACATATGTTGCCAAACCTAGAGTTCACCTTGGGAAGACAAAGTTGGCAAATGGACTATGCCGAACCTTCAAATGAGCTTACCCTCCTCAACTGTTAA 1050 0.4571 MYLSSNSMRTASSFPDLSLQISPPSISDCGGKEVGYDGSMRRLFYGDRSSTTDSGSSGSDISHEQGFLHLERAYDLRGGEPTLSLGFERATLDLPPVQLPRNLHHLHQPQIYGREFKRNARMVSGGKRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGAGQGQTDMGLNKKTGIVEVEIGSSCEKADDINAAYSLNPSPPPPPPPPPPQPPLPKSPRLECRGSLSSMERNSWSPSSQDNETTHSHFKSNHFIIKRTEVDGYGRGLHVSQCENEKLYLSTLASSHMLPNLEFTLGRQSWQMDYAEPSNELTLLNC* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01729 349 MobiDBLite consensus disorder prediction 226 279 - -
Eupl03g01729 349 MobiDBLite consensus disorder prediction 259 277 - -
Eupl03g01729 349 SUPERFAMILY Homeodomain-like 130 187 IPR009057 -
Eupl03g01729 349 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 15 336 IPR044847 GO:0000976|GO:0006355|GO:0010158
Eupl03g01729 349 MobiDBLite consensus disorder prediction 230 250 - -
Eupl03g01729 349 Pfam Myb-like DNA-binding domain 134 185 IPR001005 -
Eupl03g01729 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 186 IPR006447 GO:0003677
Eupl03g01729 349 Gene3D - 132 189 - -
Eupl03g01729 349 FunFam Myb family transcription factor 131 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01729 Eupl-Chr3 45116141 45120410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01729 1 223 G2-like Transcription Factor Family AT5G42630 51.739 8.07e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl03g01729 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01729 - - nnu:104595831 466.077