Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01721 ATGAGTGCTTCTGAGATAGAAAATTCATGTGATTATGAGAATTGTGAAGAGCTCAATCTTGACAGAGCATGTCAGGTACATGAAGAGGAAGAAACAGAAGTGGACTCTCTGCAAATCTTGGGTGTTTCTCAAAGCACACTTCCTGCTGCTCTGAGAAAGCACAGACAAAGAAGTGTCACTCACCTGAACAACCCTAACAAAAAGAAGAGAAATGAAGATCAGGGGAAGATTAGAGAATCCGAAAATAGGAATGAATCAAATCGAGTCAAGAAAAACCGTGGTAACAAATTTGCTATTAATTTTGAGAATGAAGTAGTTCCAACACATTCCAGTTATCTACGAAATGAAAGCTTGTCTACCCCAGATGATTCTTTATCAAATAAGACCAATGAAGAGAGCATAGAATCAAATGGACATGATTCATCCATTAAAGAAGAAAAGAGTTCAGGCGTGACAATTGCTAAAAGATGTTTTTATTCTAAGGTGTCTGTGACAAGGGGGCAACCAGTGACTACCCAAGAGAAAGACAGACTGATTCAGGCACTCAGTGCATTTAAATCTAAATATCCTTTCTTCCCAGTTACTCTGGGAAAAACCTATGCTCATCAAGGATTTTTGACTTCACCATCAAGCTTTGCCAAGAAATATCGGATGCATGAATCAAAGAATGTCATACTTCGGGTTTCAGATGGAAGAATGTGGTCTGTTAGGTTCAGTACTGTAACTAGTAAATCTTACCTATCTATTGGTTGGCGTGCATTCGTGGTGGAAAATAATTTGAAAGAAGGAGATGTCTGTGTCTTCGAGTTGATTAAGACGAAGGGCACTGAGCTGAAAGTTTCTATTTTCCGCATTTTTGAAGACGTGGTACCTCTGGTCAGACCTGTAAAGTGA 894 0.3904 MSASEIENSCDYENCEELNLDRACQVHEEEETEVDSLQILGVSQSTLPAALRKHRQRSVTHLNNPNKKKRNEDQGKIRESENRNESNRVKKNRGNKFAINFENEVVPTHSSYLRNESLSTPDDSLSNKTNEESIESNGHDSSIKEEKSSGVTIAKRCFYSKVSVTRGQPVTTQEKDRLIQALSAFKSKYPFFPVTLGKTYAHQGFLTSPSSFAKKYRMHESKNVILRVSDGRMWSVRFSTVTSKSYLSIGWRAFVVENNLKEGDVCVFELIKTKGTELKVSIFRIFEDVVPLVRPVK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01721 297 ProSiteProfiles B3 DNA-binding domain profile. 191 286 IPR003340 GO:0003677
Eupl03g01721 297 SUPERFAMILY DNA-binding pseudobarrel domain 185 284 IPR015300 -
Eupl03g01721 297 CDD B3_DNA 190 284 IPR003340 GO:0003677
Eupl03g01721 297 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 75 284 IPR044837 -
Eupl03g01721 297 Pfam B3 DNA binding domain 201 284 IPR003340 GO:0003677
Eupl03g01721 297 MobiDBLite consensus disorder prediction 53 94 - -
Eupl03g01721 297 MobiDBLite consensus disorder prediction 133 147 - -
Eupl03g01721 297 Gene3D - 169 287 IPR015300 -
Eupl03g01721 297 MobiDBLite consensus disorder prediction 65 94 - -
Eupl03g01721 297 SMART B3_2 191 286 IPR003340 GO:0003677
Eupl03g01721 297 MobiDBLite consensus disorder prediction 112 132 - -
Eupl03g01721 297 MobiDBLite consensus disorder prediction 112 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01721 Eupl-Chr3 45021572 45022822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01721 158 289 REM Transcription Factor Family AT1G49480 37.594 6.11e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl03g01721 B3 3e-18 CL0405