Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01716 ATGAAGCATATTTCAAAAGAAGTGTCTGAAAGTGCTATCCTAGAGGGTCCTAGTGGTAGTCATTGGCATGTCAAATTATGTAAAATGACAGATGGCACATATCTACAAGATGGTTGGCAAGATTTTCTTAGAGATCATTCATTGTGGGATTATGAATTTCTAGTTTTCAGATATGATGGGAATATGCATTTCAATGTACAAATTTTTGATAAGAGTGGATGCGAAAGAGAGGATGTATTTACTATTAAAACACATCAAGGATGTGCCTTCTTCAATGGAGGAAAGAAGCGAGTTAGACCACCAAAGCAAATTGTTGGTTCTGCCTGCAAAAAAGGGGGTAGGCTGCCAAAGAAATTTGTTGGTTCCGCCCACCTCTCCCAGTCCAAAGCTTGTGAAAAGGACCCAGGAATAGAGACAGTCACCCAGGAAAGAATTAAAACAGAGGATGTTGGCCTGCCTATCCATGAAACGAGTTCACAGGCTAGAGGCTCTCTGTCGAGGAGGAGATCCACAACTGAGGGAGAAAAAGCAAGAGTTTGGAAAGCAGCCAATTCTTTTACCTCCAATCTTCCTTATTTTATGAGGTGCTTGAGAGCATCCAACGTGTACAGGGTATTCGTTCTGGCTATCCCTCTCAGCTTCGCTAGGGAACATTTACCTAAATGCAAATCAAAGATTGTCCTTCGGAATCCGAAAGGGAAGGCTTGGATTGTGAATTCGATTCCTGGTTATGGAAGGTATGATTTTTGTGGAGGGTGGACTGACTTTGTACGTGGTAACAAGCTTGAAGAAGGAGACATCTGCATATTTGAGCTGGTGGGTGAATATGAAATGCGTGTGCATATTTTCCGGTTGAACAAGGAAGTTTGA 870 0.4195 MKHISKEVSESAILEGPSGSHWHVKLCKMTDGTYLQDGWQDFLRDHSLWDYEFLVFRYDGNMHFNVQIFDKSGCEREDVFTIKTHQGCAFFNGGKKRVRPPKQIVGSACKKGGRLPKKFVGSAHLSQSKACEKDPGIETVTQERIKTEDVGLPIHETSSQARGSLSRRRSTTEGEKARVWKAANSFTSNLPYFMRCLRASNVYRVFVLAIPLSFAREHLPKCKSKIVLRNPKGKAWIVNSIPGYGRYDFCGGWTDFVRGNKLEEGDICIFELVGEYEMRVHIFRLNKEV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01716 289 ProSiteProfiles B3 DNA-binding domain profile. 1 72 IPR003340 GO:0003677
Eupl03g01716 289 SMART B3_2 1 72 IPR003340 GO:0003677
Eupl03g01716 289 SMART B3_2 193 286 IPR003340 GO:0003677
Eupl03g01716 289 Pfam B3 DNA binding domain 193 284 IPR003340 GO:0003677
Eupl03g01716 289 Pfam B3 DNA binding domain 5 71 IPR003340 GO:0003677
Eupl03g01716 289 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 2 288 IPR044837 -
Eupl03g01716 289 Gene3D - 170 287 IPR015300 -
Eupl03g01716 289 ProSiteProfiles B3 DNA-binding domain profile. 193 286 IPR003340 GO:0003677
Eupl03g01716 289 SUPERFAMILY DNA-binding pseudobarrel domain 186 286 IPR015300 -
Eupl03g01716 289 CDD B3_DNA 2 70 IPR003340 GO:0003677
Eupl03g01716 289 SUPERFAMILY DNA-binding pseudobarrel domain 4 74 IPR015300 -
Eupl03g01716 289 Gene3D - 1 74 IPR015300 -
Eupl03g01716 289 CDD B3_DNA 191 284 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01716 Eupl-Chr3 44990233 44994289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01716 2 286 B3 DNA Binding Superfamily AT3G18990 27.726 1.82e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl03g01716 B3 5.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01716 - - tss:122662353 263.077