Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01715 ATGGTGAAGAACAGTAGAAATAGTATCTGTCCAGACGAGAGATCTCCTCATTTCTTCAAGATTGTGCATCCCGACCTTACCACCCAATGCTTGCGGATCCCGCCAGAATTTATGAAGCATATTTCAAAAGAAGTGTCTGAAAGAGCTATCCTAGAGGGTCCTAGTGGTAATCATTGGCATGTCAAGTTATGTAAAACGACAGATGGTACATATCTACAAGATGGTTGGCAGGATTTTCTTAGAGATCATTCCTTGTGGGATTATGAATTTCTAGTTTTCAGATATGATGGGAATATGCATTTCAATGTACAAATATTTGATAAGAGTGGATGCGAAAGAGAGGATGTATTTACTATTAAAACACATCAAGGATATGCCTTCTCCAATGGAGGAAATAAGCGGGGTAGACCACCAAAGAAAATTGTTGGTTCTGCCTGCAAAAAAGGGGGTAGACCTCCAAAGAAATTTGTTGGTTCCGGCCACCTCTCCCAGTCAAAAGCTTGTGAAAAGGACCCAGGAATAGAGACAGTCACCCAGGAAAGAATTAAAACAGAGGATGTTGGCCTGCCTATTCATGAAAGGAGTTCACAGGATAGAGGCTCTCTGTCAAGAAGGAGATCTGCAACAGAGGGAGAAAAAGCAAGAGTTTGGAAAGCAGCCAATTCTTTTACCTCAAATCTTCCTTATTTTATGAGGTGCTTGGGAGCGTGCAACGTGTACAAGTCATTTGTCCTGGCTATCCCTGTTAGATTTGCTAGGGAACATTTACCTAGATGGAAAGCAAAGGTTGTCCTTCGGAATCCGAAAGGGAAGGCTTGGATTGTGAATTCAGTTCCTGGTAATGGAAGGACGTATACTTTTTGTGGAGGGTGGACTGACTTTGTACGTGGTAACAAGCTTGAAGAAGGAGACATCTGCGTATTTGAACTGGTGGGTGAATCTGAAATGTGTGTGCATATTTTCCGGTTGATCAAGGAAATTAAGTTTGAGTGTTGA 996 0.4187 MVKNSRNSICPDERSPHFFKIVHPDLTTQCLRIPPEFMKHISKEVSERAILEGPSGNHWHVKLCKTTDGTYLQDGWQDFLRDHSLWDYEFLVFRYDGNMHFNVQIFDKSGCEREDVFTIKTHQGYAFSNGGNKRGRPPKKIVGSACKKGGRPPKKFVGSGHLSQSKACEKDPGIETVTQERIKTEDVGLPIHERSSQDRGSLSRRRSATEGEKARVWKAANSFTSNLPYFMRCLGACNVYKSFVLAIPVRFAREHLPRWKAKVVLRNPKGKAWIVNSVPGNGRTYTFCGGWTDFVRGNKLEEGDICVFELVGESEMCVHIFRLIKEIKFEC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01715 331 Gene3D - 208 325 IPR015300 -
Eupl03g01715 331 SUPERFAMILY DNA-binding pseudobarrel domain 13 111 IPR015300 -
Eupl03g01715 331 CDD B3_DNA 16 107 IPR003340 GO:0003677
Eupl03g01715 331 Gene3D - 9 111 IPR015300 -
Eupl03g01715 331 Pfam B3 DNA binding domain 238 322 IPR003340 GO:0003677
Eupl03g01715 331 Pfam B3 DNA binding domain 18 108 IPR003340 GO:0003677
Eupl03g01715 331 SMART B3_2 18 109 IPR003340 GO:0003677
Eupl03g01715 331 SMART B3_2 230 324 IPR003340 GO:0003677
Eupl03g01715 331 SUPERFAMILY DNA-binding pseudobarrel domain 225 322 IPR015300 -
Eupl03g01715 331 ProSiteProfiles B3 DNA-binding domain profile. 230 324 IPR003340 GO:0003677
Eupl03g01715 331 CDD B3_DNA 228 322 IPR003340 GO:0003677
Eupl03g01715 331 MobiDBLite consensus disorder prediction 185 211 - -
Eupl03g01715 331 ProSiteProfiles B3 DNA-binding domain profile. 16 109 IPR003340 GO:0003677
Eupl03g01715 331 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 31 324 IPR044837 -
Eupl03g01715 331 MobiDBLite consensus disorder prediction 156 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01715 Eupl-Chr3 44981681 44986430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01715 16 320 B3 DNA Binding Superfamily AT3G18990 26.627 1.01e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl03g01715 B3 3.3e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01715 - - tss:122662353 305.834